Hb_000037_190

Information

Type -
Description -
Location Contig37: 370679-372789
Sequence    

Annotation

kegg
ID pop:POPTR_0014s16350g
description POPTRDRAFT_664876; hypothetical protein
nr
ID XP_012081454.1
description PREDICTED: uncharacterized protein LOC105641500 [Jatropha curcas]
swissprot
ID A5UYW4
description Chaperone protein DnaJ OS=Roseiflexus sp. (strain RS-1) GN=dnaJ PE=3 SV=1
trembl
ID A0A067K1A8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18486 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000037_190 0.0 - - PREDICTED: uncharacterized protein LOC105641500 [Jatropha curcas]
2 Hb_003504_030 0.0542401735 - - PREDICTED: serine/threonine-protein phosphatase PP1-like isoform X2 [Jatropha curcas]
3 Hb_002732_040 0.0617300019 - - PREDICTED: uncharacterized protein LOC105628163 isoform X1 [Jatropha curcas]
4 Hb_000174_270 0.0619130793 - - PREDICTED: type II inositol 1,4,5-trisphosphate 5-phosphatase FRA3 isoform X1 [Jatropha curcas]
5 Hb_001329_140 0.0670631165 - - PREDICTED: zinc finger protein 598 [Jatropha curcas]
6 Hb_003168_110 0.0710610072 transcription factor TF Family: SWI/SNF-SWI3 PREDICTED: lysine-specific histone demethylase 1 homolog 1 [Jatropha curcas]
7 Hb_000866_460 0.0733409261 - - PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic-like [Jatropha curcas]
8 Hb_000343_250 0.073379579 - - PREDICTED: protein CASC3 [Jatropha curcas]
9 Hb_000213_010 0.075462019 - - PREDICTED: villin-3-like isoform X1 [Populus euphratica]
10 Hb_000060_090 0.0771898848 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor A-4a [Jatropha curcas]
11 Hb_001498_010 0.0773093024 - - PREDICTED: uncharacterized protein LOC105648994 [Jatropha curcas]
12 Hb_000958_140 0.0775462382 - - PREDICTED: uncharacterized protein LOC105628714 [Jatropha curcas]
13 Hb_000684_250 0.0786283463 - - PREDICTED: uncharacterized protein LOC105642172 [Jatropha curcas]
14 Hb_001047_220 0.0788490751 - - PREDICTED: F-box protein SKIP17-like [Jatropha curcas]
15 Hb_002843_120 0.07982857 - - PREDICTED: uncharacterized protein LOC105645113 isoform X1 [Jatropha curcas]
16 Hb_000327_270 0.0814977439 - - PREDICTED: leukocyte receptor cluster member 8 homolog isoform X1 [Jatropha curcas]
17 Hb_001799_180 0.0816133517 - - PREDICTED: serine/threonine-protein kinase D6PK [Jatropha curcas]
18 Hb_003494_020 0.0818292591 - - ATP-dependent RNA and DNA helicase, putative [Ricinus communis]
19 Hb_001004_060 0.0823204728 - - PREDICTED: uncharacterized protein LOC105630220 isoform X4 [Jatropha curcas]
20 Hb_002234_170 0.0824379286 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000037_190 Hb_000037_190 Hb_003504_030 Hb_003504_030 Hb_000037_190--Hb_003504_030 Hb_002732_040 Hb_002732_040 Hb_000037_190--Hb_002732_040 Hb_000174_270 Hb_000174_270 Hb_000037_190--Hb_000174_270 Hb_001329_140 Hb_001329_140 Hb_000037_190--Hb_001329_140 Hb_003168_110 Hb_003168_110 Hb_000037_190--Hb_003168_110 Hb_000866_460 Hb_000866_460 Hb_000037_190--Hb_000866_460 Hb_000327_270 Hb_000327_270 Hb_003504_030--Hb_000327_270 Hb_001799_180 Hb_001799_180 Hb_003504_030--Hb_001799_180 Hb_013399_100 Hb_013399_100 Hb_003504_030--Hb_013399_100 Hb_003504_030--Hb_002732_040 Hb_001409_020 Hb_001409_020 Hb_003504_030--Hb_001409_020 Hb_000343_250 Hb_000343_250 Hb_002732_040--Hb_000343_250 Hb_007747_040 Hb_007747_040 Hb_002732_040--Hb_007747_040 Hb_000462_060 Hb_000462_060 Hb_002732_040--Hb_000462_060 Hb_020378_030 Hb_020378_030 Hb_002732_040--Hb_020378_030 Hb_002732_040--Hb_000866_460 Hb_002732_040--Hb_000327_270 Hb_003494_020 Hb_003494_020 Hb_000174_270--Hb_003494_020 Hb_001999_290 Hb_001999_290 Hb_000174_270--Hb_001999_290 Hb_000028_130 Hb_000028_130 Hb_000174_270--Hb_000028_130 Hb_062226_070 Hb_062226_070 Hb_000174_270--Hb_062226_070 Hb_001635_120 Hb_001635_120 Hb_000174_270--Hb_001635_120 Hb_000684_250 Hb_000684_250 Hb_001329_140--Hb_000684_250 Hb_001329_140--Hb_003168_110 Hb_000803_260 Hb_000803_260 Hb_001329_140--Hb_000803_260 Hb_000457_260 Hb_000457_260 Hb_001329_140--Hb_000457_260 Hb_000590_050 Hb_000590_050 Hb_001329_140--Hb_000590_050 Hb_003168_110--Hb_000684_250 Hb_003168_110--Hb_003494_020 Hb_003168_110--Hb_000590_050 Hb_000009_560 Hb_000009_560 Hb_003168_110--Hb_000009_560 Hb_000890_060 Hb_000890_060 Hb_003168_110--Hb_000890_060 Hb_001322_130 Hb_001322_130 Hb_000866_460--Hb_001322_130 Hb_002205_250 Hb_002205_250 Hb_000866_460--Hb_002205_250 Hb_000243_210 Hb_000243_210 Hb_000866_460--Hb_000243_210 Hb_002253_080 Hb_002253_080 Hb_000866_460--Hb_002253_080 Hb_001279_120 Hb_001279_120 Hb_000866_460--Hb_001279_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.4222 11.8874 7.73251 11.3151 11.6229 11.789
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.11956 5.97669 13.1413 7.21009 13.0433

CAGE analysis