Hb_000039_120

Information

Type -
Description -
Location Contig39: 170892-174722
Sequence    

Annotation

kegg
ID rcu:RCOM_1096470
description nucleoside transporter, putative
nr
ID XP_012091469.1
description PREDICTED: equilibrative nucleotide transporter 3-like [Jatropha curcas]
swissprot
ID Q9M0Y3
description Equilibrative nucleotide transporter 3 OS=Arabidopsis thaliana GN=ENT3 PE=1 SV=1
trembl
ID A0A067JDN0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21339 PE=4 SV=1
Gene Ontology
ID GO:0016021
description equilibrative nucleotide transporter 3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39053: 171637-172171 , PASA_asmbl_39054: 172375-173203
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000039_120 0.0 - - PREDICTED: equilibrative nucleotide transporter 3-like [Jatropha curcas]
2 Hb_171900_110 0.1134105578 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT3-like [Populus euphratica]
3 Hb_000780_160 0.1165450904 - - hypothetical protein RCOM_0483300 [Ricinus communis]
4 Hb_000032_590 0.1401182217 - - PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1 [Jatropha curcas]
5 Hb_000311_110 0.1433358432 - - ATP-binding cassette transporter, putative [Ricinus communis]
6 Hb_001999_050 0.143439546 rubber biosynthesis Gene Name: CPT7 PREDICTED: dehydrodolichyl diphosphate synthase 2 [Jatropha curcas]
7 Hb_004126_050 0.1449047533 - - PREDICTED: L-type lectin-domain containing receptor kinase VII.1 [Tarenaya hassleriana]
8 Hb_022487_010 0.1455116585 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
9 Hb_006243_010 0.1464282388 - - PREDICTED: cell wall protein IFF6 [Populus euphratica]
10 Hb_000112_040 0.1466792942 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
11 Hb_005240_010 0.153678295 transcription factor TF Family: NAC PREDICTED: NAC transcription factor NAM-B2 [Jatropha curcas]
12 Hb_000072_240 0.1598613827 transcription factor TF Family: C2C2-CO-like zinc finger protein, putative [Ricinus communis]
13 Hb_002211_020 0.1602695029 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 5-like [Jatropha curcas]
14 Hb_000049_290 0.1603563892 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 1 [Jatropha curcas]
15 Hb_132259_010 0.1641612237 - - PREDICTED: WAT1-related protein At5g64700 [Jatropha curcas]
16 Hb_000331_220 0.165668659 - - conserved hypothetical protein [Ricinus communis]
17 Hb_115114_010 0.1665542938 - - conserved hypothetical protein [Ricinus communis]
18 Hb_004324_220 0.1677954025 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 53 [Jatropha curcas]
19 Hb_064293_010 0.1703285435 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
20 Hb_044624_010 0.1717732102 - - -

Gene co-expression network

sample Hb_000039_120 Hb_000039_120 Hb_171900_110 Hb_171900_110 Hb_000039_120--Hb_171900_110 Hb_000780_160 Hb_000780_160 Hb_000039_120--Hb_000780_160 Hb_000032_590 Hb_000032_590 Hb_000039_120--Hb_000032_590 Hb_000311_110 Hb_000311_110 Hb_000039_120--Hb_000311_110 Hb_001999_050 Hb_001999_050 Hb_000039_120--Hb_001999_050 Hb_004126_050 Hb_004126_050 Hb_000039_120--Hb_004126_050 Hb_171900_110--Hb_000032_590 Hb_005240_010 Hb_005240_010 Hb_171900_110--Hb_005240_010 Hb_171900_110--Hb_000780_160 Hb_000112_040 Hb_000112_040 Hb_171900_110--Hb_000112_040 Hb_171900_110--Hb_004126_050 Hb_000780_160--Hb_004126_050 Hb_006243_010 Hb_006243_010 Hb_000780_160--Hb_006243_010 Hb_000780_160--Hb_000032_590 Hb_019863_050 Hb_019863_050 Hb_000780_160--Hb_019863_050 Hb_006358_030 Hb_006358_030 Hb_000032_590--Hb_006358_030 Hb_000032_590--Hb_005240_010 Hb_005772_020 Hb_005772_020 Hb_000032_590--Hb_005772_020 Hb_115114_010 Hb_115114_010 Hb_000032_590--Hb_115114_010 Hb_132259_010 Hb_132259_010 Hb_000032_590--Hb_132259_010 Hb_000311_110--Hb_001999_050 Hb_119832_010 Hb_119832_010 Hb_000311_110--Hb_119832_010 Hb_018105_010 Hb_018105_010 Hb_000311_110--Hb_018105_010 Hb_009393_110 Hb_009393_110 Hb_000311_110--Hb_009393_110 Hb_003440_080 Hb_003440_080 Hb_000311_110--Hb_003440_080 Hb_000311_110--Hb_000780_160 Hb_001999_050--Hb_018105_010 Hb_001205_170 Hb_001205_170 Hb_001999_050--Hb_001205_170 Hb_001999_050--Hb_119832_010 Hb_001999_050--Hb_171900_110 Hb_004126_050--Hb_006243_010 Hb_005337_140 Hb_005337_140 Hb_004126_050--Hb_005337_140 Hb_004126_050--Hb_005240_010 Hb_000061_440 Hb_000061_440 Hb_004126_050--Hb_000061_440
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.73545 0.728481 0.611614 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.109976 0 0 0.0948434 2.18169

CAGE analysis