Hb_000039_130

Information

Type -
Description -
Location Contig39: 175590-177130
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0003676
description at4g21420p-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000039_130 0.0 - - -
2 Hb_053709_020 0.0019599037 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
3 Hb_184500_020 0.0020617386 - - -
4 Hb_000494_140 0.0021168195 transcription factor TF Family: ERF hypothetical protein JCGZ_14625 [Jatropha curcas]
5 Hb_023930_010 0.0030482558 - - hypothetical protein RCOM_0641040 [Ricinus communis]
6 Hb_000125_050 0.003675185 - - -
7 Hb_000032_110 0.004897289 - - nadhp hc toxin reductase, putative [Ricinus communis]
8 Hb_002918_100 0.0050162966 - - hypothetical protein JCGZ_21466 [Jatropha curcas]
9 Hb_000295_150 0.0081957733 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
10 Hb_007040_020 0.008997285 - - -
11 Hb_003914_040 0.0090048422 - - hypothetical protein EUGRSUZ_H02626 [Eucalyptus grandis]
12 Hb_001689_060 0.0090100085 - - PREDICTED: uncharacterized protein LOC103846154 [Brassica rapa]
13 Hb_000733_140 0.0113822815 - - PREDICTED: ras-related protein Rab2BV-like [Jatropha curcas]
14 Hb_001343_070 0.0148951434 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62680, mitochondrial-like [Jatropha curcas]
15 Hb_002909_030 0.0150771432 transcription factor TF Family: C2H2 hypothetical protein RCOM_1270600 [Ricinus communis]
16 Hb_001545_090 0.0197329676 - - PREDICTED: uncharacterized protein LOC103874823 [Brassica rapa]
17 Hb_008686_050 0.0211014004 - - -
18 Hb_000235_020 0.0236920969 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000049_320 0.0259076083 - - PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA5 [Jatropha curcas]
20 Hb_001973_020 0.0264078436 - - -

Gene co-expression network

sample Hb_000039_130 Hb_000039_130 Hb_053709_020 Hb_053709_020 Hb_000039_130--Hb_053709_020 Hb_184500_020 Hb_184500_020 Hb_000039_130--Hb_184500_020 Hb_000494_140 Hb_000494_140 Hb_000039_130--Hb_000494_140 Hb_023930_010 Hb_023930_010 Hb_000039_130--Hb_023930_010 Hb_000125_050 Hb_000125_050 Hb_000039_130--Hb_000125_050 Hb_000032_110 Hb_000032_110 Hb_000039_130--Hb_000032_110 Hb_053709_020--Hb_184500_020 Hb_053709_020--Hb_023930_010 Hb_053709_020--Hb_000032_110 Hb_002918_100 Hb_002918_100 Hb_053709_020--Hb_002918_100 Hb_053709_020--Hb_000494_140 Hb_184500_020--Hb_023930_010 Hb_184500_020--Hb_000032_110 Hb_184500_020--Hb_002918_100 Hb_184500_020--Hb_000494_140 Hb_000494_140--Hb_000125_050 Hb_000494_140--Hb_023930_010 Hb_000295_150 Hb_000295_150 Hb_000494_140--Hb_000295_150 Hb_023930_010--Hb_000032_110 Hb_023930_010--Hb_002918_100 Hb_000125_050--Hb_000295_150 Hb_007040_020 Hb_007040_020 Hb_000125_050--Hb_007040_020 Hb_003914_040 Hb_003914_040 Hb_000125_050--Hb_003914_040 Hb_000125_050--Hb_053709_020 Hb_000032_110--Hb_002918_100 Hb_001689_060 Hb_001689_060 Hb_000032_110--Hb_001689_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.736678 1.94434 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis