Hb_000042_060

Information

Type -
Description -
Location Contig42: 74042-76762
Sequence    

Annotation

kegg
ID rcu:RCOM_1253960
description S-adenosylmethionine-dependent methyltransferase, putative
nr
ID XP_012070633.1
description PREDICTED: uncharacterized protein LOC105632794 [Jatropha curcas]
swissprot
ID Q2YY85
description Demethylmenaquinone methyltransferase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=menG PE=3 SV=1
trembl
ID A0A067KS17
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00684 PE=4 SV=1
Gene Ontology
ID GO:0005774
description s-adenosyl-l-methionine-dependent methyltransferases superfamily protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41459: 74099-76902 , PASA_asmbl_41461: 74985-75138
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000042_060 0.0 - - PREDICTED: uncharacterized protein LOC105632794 [Jatropha curcas]
2 Hb_006422_020 0.1500328366 - - PREDICTED: uncharacterized protein LOC105649338 [Jatropha curcas]
3 Hb_167775_010 0.1571282096 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
4 Hb_002374_550 0.1605988427 - - PREDICTED: aspartic proteinase nepenthesin-1 [Jatropha curcas]
5 Hb_001269_520 0.1611580926 - - PREDICTED: putative receptor-like protein kinase At1g80870 [Jatropha curcas]
6 Hb_000251_050 0.1625306462 - - hypothetical protein JCGZ_21678 [Jatropha curcas]
7 Hb_000071_160 0.1707215667 - - PREDICTED: protein IQ-DOMAIN 14 [Jatropha curcas]
8 Hb_000579_030 0.1708330469 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 3 [Jatropha curcas]
9 Hb_002559_030 0.1709820172 - - oxidoreductase, putative [Ricinus communis]
10 Hb_001195_250 0.1733276578 - - lrr receptor protein kinase, putative [Ricinus communis]
11 Hb_000589_420 0.1733506586 - - PREDICTED: uncharacterized protein LOC105647273 [Jatropha curcas]
12 Hb_006717_010 0.1737275196 - - PREDICTED: uncharacterized protein LOC105649338 [Jatropha curcas]
13 Hb_105033_010 0.1775917502 - - PREDICTED: probable beta-1,3-galactosyltransferase 2 isoform X2 [Jatropha curcas]
14 Hb_000964_170 0.1780672147 - - Cellulose synthase A catalytic subunit 6 [UDP-forming], putative [Ricinus communis]
15 Hb_011828_010 0.1792452387 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Jatropha curcas]
16 Hb_014361_090 0.1802815826 - - acyl-CoA binding protein 3A [Vernicia fordii]
17 Hb_003102_030 0.1814236766 - - PREDICTED: uncharacterized protein LOC105644418 [Jatropha curcas]
18 Hb_010417_130 0.1825537668 - - PREDICTED: probable membrane-associated kinase regulator 2 [Jatropha curcas]
19 Hb_002909_100 0.1854538595 - - PREDICTED: uncharacterized protein LOC105648153 [Jatropha curcas]
20 Hb_000997_100 0.1857752254 - - PREDICTED: uncharacterized protein LOC105632094 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000042_060 Hb_000042_060 Hb_006422_020 Hb_006422_020 Hb_000042_060--Hb_006422_020 Hb_167775_010 Hb_167775_010 Hb_000042_060--Hb_167775_010 Hb_002374_550 Hb_002374_550 Hb_000042_060--Hb_002374_550 Hb_001269_520 Hb_001269_520 Hb_000042_060--Hb_001269_520 Hb_000251_050 Hb_000251_050 Hb_000042_060--Hb_000251_050 Hb_000071_160 Hb_000071_160 Hb_000042_060--Hb_000071_160 Hb_000997_100 Hb_000997_100 Hb_006422_020--Hb_000997_100 Hb_000031_230 Hb_000031_230 Hb_006422_020--Hb_000031_230 Hb_000815_230 Hb_000815_230 Hb_006422_020--Hb_000815_230 Hb_000964_170 Hb_000964_170 Hb_006422_020--Hb_000964_170 Hb_003849_160 Hb_003849_160 Hb_006422_020--Hb_003849_160 Hb_029748_020 Hb_029748_020 Hb_167775_010--Hb_029748_020 Hb_000589_420 Hb_000589_420 Hb_167775_010--Hb_000589_420 Hb_003912_080 Hb_003912_080 Hb_167775_010--Hb_003912_080 Hb_001195_250 Hb_001195_250 Hb_167775_010--Hb_001195_250 Hb_000321_120 Hb_000321_120 Hb_167775_010--Hb_000321_120 Hb_002909_100 Hb_002909_100 Hb_167775_010--Hb_002909_100 Hb_005941_030 Hb_005941_030 Hb_002374_550--Hb_005941_030 Hb_007044_160 Hb_007044_160 Hb_002374_550--Hb_007044_160 Hb_003102_030 Hb_003102_030 Hb_002374_550--Hb_003102_030 Hb_000914_050 Hb_000914_050 Hb_002374_550--Hb_000914_050 Hb_014361_090 Hb_014361_090 Hb_002374_550--Hb_014361_090 Hb_001269_520--Hb_000251_050 Hb_002110_090 Hb_002110_090 Hb_001269_520--Hb_002110_090 Hb_000417_020 Hb_000417_020 Hb_001269_520--Hb_000417_020 Hb_001538_020 Hb_001538_020 Hb_001269_520--Hb_001538_020 Hb_001269_520--Hb_001195_250 Hb_000270_710 Hb_000270_710 Hb_001269_520--Hb_000270_710 Hb_000251_050--Hb_002110_090 Hb_049293_010 Hb_049293_010 Hb_000251_050--Hb_049293_010 Hb_002099_060 Hb_002099_060 Hb_000251_050--Hb_002099_060 Hb_000251_050--Hb_001195_250 Hb_000418_150 Hb_000418_150 Hb_000251_050--Hb_000418_150 Hb_000071_160--Hb_005941_030 Hb_000071_160--Hb_014361_090 Hb_011828_010 Hb_011828_010 Hb_000071_160--Hb_011828_010 Hb_000271_220 Hb_000271_220 Hb_000071_160--Hb_000271_220 Hb_004899_340 Hb_004899_340 Hb_000071_160--Hb_004899_340 Hb_003929_190 Hb_003929_190 Hb_000071_160--Hb_003929_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.94496 20.6761 13.0356 27.971 6.81646 5.03705
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.04416 0.144966 0.136256 4.04971 29.4355

CAGE analysis