Hb_000042_120

Information

Type -
Description -
Location Contig42: 130365-131513
Sequence    

Annotation

kegg
ID vvi:100246927
description uncharacterized LOC100246927
nr
ID XP_012070637.1
description PREDICTED: uncharacterized protein LOC105632800 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KS22
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00689 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000042_120 0.0 - - PREDICTED: uncharacterized protein LOC105632800 [Jatropha curcas]
2 Hb_001347_020 0.1012061056 - - PREDICTED: cytochrome P450 86B1-like [Populus euphratica]
3 Hb_000422_100 0.1012513187 - - PREDICTED: TMV resistance protein N-like [Populus euphratica]
4 Hb_111442_010 0.1014092319 desease resistance Gene Name: AAA_16 LRR and NB-ARC domains-containing disease resistance protein, putative [Theobroma cacao]
5 Hb_130357_010 0.1014447047 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
6 Hb_003729_040 0.1018442604 - - o-methyltransferase, putative [Ricinus communis]
7 Hb_000628_090 0.1019367523 - - hypothetical protein B456_010G019400 [Gossypium raimondii]
8 Hb_054865_110 0.1020990075 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000194_040 0.1021629377 - - carbonic anhydrase, putative [Ricinus communis]
10 Hb_069237_010 0.1026819493 - - -
11 Hb_000258_010 0.1054715846 - - lipid transfer precursor protein [Hevea brasiliensis]
12 Hb_002601_030 0.1067550239 - - PREDICTED: uncharacterized protein LOC105634908 [Jatropha curcas]
13 Hb_118730_050 0.1068964419 - - RING/U-box superfamily protein isoform 4 [Theobroma cacao]
14 Hb_002783_290 0.1069382482 - - Uncharacterized protein TCM_034216 [Theobroma cacao]
15 Hb_005976_030 0.1069969695 - - PREDICTED: uncharacterized protein LOC105639715 [Jatropha curcas]
16 Hb_178734_010 0.1079313974 - - PREDICTED: uncharacterized protein LOC103331175 [Prunus mume]
17 Hb_000389_120 0.1089773405 - - hypothetical protein JCGZ_20066 [Jatropha curcas]
18 Hb_049573_010 0.1093737633 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003874_030 0.1113953037 - - hypothetical protein JCGZ_00004 [Jatropha curcas]
20 Hb_001892_040 0.1117889812 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]

Gene co-expression network

sample Hb_000042_120 Hb_000042_120 Hb_001347_020 Hb_001347_020 Hb_000042_120--Hb_001347_020 Hb_000422_100 Hb_000422_100 Hb_000042_120--Hb_000422_100 Hb_111442_010 Hb_111442_010 Hb_000042_120--Hb_111442_010 Hb_130357_010 Hb_130357_010 Hb_000042_120--Hb_130357_010 Hb_003729_040 Hb_003729_040 Hb_000042_120--Hb_003729_040 Hb_000628_090 Hb_000628_090 Hb_000042_120--Hb_000628_090 Hb_001347_020--Hb_000422_100 Hb_001347_020--Hb_111442_010 Hb_001347_020--Hb_000628_090 Hb_001347_020--Hb_130357_010 Hb_054865_110 Hb_054865_110 Hb_001347_020--Hb_054865_110 Hb_000194_040 Hb_000194_040 Hb_001347_020--Hb_000194_040 Hb_000422_100--Hb_111442_010 Hb_000422_100--Hb_000628_090 Hb_000422_100--Hb_054865_110 Hb_000422_100--Hb_000194_040 Hb_000422_100--Hb_130357_010 Hb_111442_010--Hb_000628_090 Hb_111442_010--Hb_054865_110 Hb_111442_010--Hb_000194_040 Hb_111442_010--Hb_130357_010 Hb_130357_010--Hb_003729_040 Hb_069237_010 Hb_069237_010 Hb_130357_010--Hb_069237_010 Hb_130357_010--Hb_000628_090 Hb_003729_040--Hb_069237_010 Hb_003729_040--Hb_001347_020 Hb_003729_040--Hb_000422_100 Hb_000258_010 Hb_000258_010 Hb_003729_040--Hb_000258_010 Hb_003729_040--Hb_111442_010 Hb_000628_090--Hb_054865_110 Hb_000628_090--Hb_000194_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0215956 0 0.0494271 0.991902 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis