Hb_000042_220

Information

Type -
Description -
Location Contig42: 188328-189049
Sequence    

Annotation

kegg
ID rcu:RCOM_0517450
description hypothetical protein
nr
ID XP_012070650.1
description PREDICTED: uncharacterized protein LOC105632809 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L362
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00697 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000042_220 0.0 - - PREDICTED: uncharacterized protein LOC105632809 [Jatropha curcas]
2 Hb_001504_140 0.2394366971 - - PREDICTED: deSI-like protein At4g17486 [Populus euphratica]
3 Hb_011472_010 0.2525599381 - - PREDICTED: protein yippee-like [Jatropha curcas]
4 Hb_002835_430 0.2589493116 - - Alliin lyase precursor, putative [Ricinus communis]
5 Hb_001712_040 0.2638013502 - - Calmodulin, putative [Ricinus communis]
6 Hb_144484_010 0.2656395683 - - calcineurin-like phosphoesterase [Manihot esculenta]
7 Hb_007672_030 0.2741598237 transcription factor TF Family: LOB LOB domain-containing 36 -like protein [Gossypium arboreum]
8 Hb_000922_120 0.2743716629 - - PREDICTED: carbonic anhydrase 2-like [Jatropha curcas]
9 Hb_000166_060 0.2764163765 - - conserved hypothetical protein [Ricinus communis]
10 Hb_012022_130 0.2787025053 - - Vacuolar cation/proton exchanger 1a, putative [Ricinus communis]
11 Hb_003032_100 0.2854577999 - - PREDICTED: GDP-mannose transporter GONST4 [Jatropha curcas]
12 Hb_067793_010 0.2913264361 - - PREDICTED: uncharacterized protein LOC104112577 [Nicotiana tomentosiformis]
13 Hb_003777_170 0.2945115755 - - conserved hypothetical protein [Ricinus communis]
14 Hb_005306_010 0.2948499453 - - -
15 Hb_012163_020 0.2983063298 - - PREDICTED: uncharacterized protein LOC105650815 isoform X3 [Jatropha curcas]
16 Hb_158092_010 0.2991621273 - - CYP51 [Hevea brasiliensis]
17 Hb_002078_170 0.3013183251 - - ELMO/CED-12 domain-containing protein isoform 3 [Theobroma cacao]
18 Hb_023301_010 0.3018544811 - - PREDICTED: serine/threonine-protein kinase AGC1-7 [Jatropha curcas]
19 Hb_000069_770 0.3019458519 - - translation initiation factor [Rheum australe]
20 Hb_003589_080 0.3047940553 - - PREDICTED: uncharacterized protein LOC105107863 [Populus euphratica]

Gene co-expression network

sample Hb_000042_220 Hb_000042_220 Hb_001504_140 Hb_001504_140 Hb_000042_220--Hb_001504_140 Hb_011472_010 Hb_011472_010 Hb_000042_220--Hb_011472_010 Hb_002835_430 Hb_002835_430 Hb_000042_220--Hb_002835_430 Hb_001712_040 Hb_001712_040 Hb_000042_220--Hb_001712_040 Hb_144484_010 Hb_144484_010 Hb_000042_220--Hb_144484_010 Hb_007672_030 Hb_007672_030 Hb_000042_220--Hb_007672_030 Hb_001504_140--Hb_144484_010 Hb_005671_020 Hb_005671_020 Hb_001504_140--Hb_005671_020 Hb_001635_020 Hb_001635_020 Hb_001504_140--Hb_001635_020 Hb_002473_110 Hb_002473_110 Hb_001504_140--Hb_002473_110 Hb_001504_140--Hb_011472_010 Hb_158092_010 Hb_158092_010 Hb_001504_140--Hb_158092_010 Hb_012163_020 Hb_012163_020 Hb_011472_010--Hb_012163_020 Hb_000732_210 Hb_000732_210 Hb_011472_010--Hb_000732_210 Hb_007943_190 Hb_007943_190 Hb_011472_010--Hb_007943_190 Hb_001377_420 Hb_001377_420 Hb_011472_010--Hb_001377_420 Hb_000922_120 Hb_000922_120 Hb_011472_010--Hb_000922_120 Hb_001123_240 Hb_001123_240 Hb_002835_430--Hb_001123_240 Hb_000788_060 Hb_000788_060 Hb_002835_430--Hb_000788_060 Hb_005306_010 Hb_005306_010 Hb_002835_430--Hb_005306_010 Hb_006907_080 Hb_006907_080 Hb_002835_430--Hb_006907_080 Hb_001242_050 Hb_001242_050 Hb_002835_430--Hb_001242_050 Hb_001712_040--Hb_144484_010 Hb_012022_130 Hb_012022_130 Hb_001712_040--Hb_012022_130 Hb_001712_040--Hb_000922_120 Hb_002843_080 Hb_002843_080 Hb_001712_040--Hb_002843_080 Hb_002272_280 Hb_002272_280 Hb_001712_040--Hb_002272_280 Hb_001712_040--Hb_001504_140 Hb_144484_010--Hb_012022_130 Hb_144484_010--Hb_001635_020 Hb_144484_010--Hb_000922_120 Hb_000167_030 Hb_000167_030 Hb_144484_010--Hb_000167_030 Hb_014720_090 Hb_014720_090 Hb_007672_030--Hb_014720_090 Hb_002998_070 Hb_002998_070 Hb_007672_030--Hb_002998_070 Hb_007672_030--Hb_000732_210 Hb_021576_020 Hb_021576_020 Hb_007672_030--Hb_021576_020 Hb_007672_030--Hb_011472_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.14606 0 0.26535 0.891879 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.695641 0.273801 1.58118 0.252873 0

CAGE analysis