Hb_000046_130

Information

Type -
Description -
Location Contig46: 100940-107827
Sequence    

Annotation

kegg
ID rcu:RCOM_0679190
description Peroxidase 27 precursor, putative (EC:1.11.1.7)
nr
ID XP_002516845.1
description Peroxidase 27 precursor, putative [Ricinus communis]
swissprot
ID Q9ZV04
description Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1
trembl
ID B9RSX6
description Peroxidase OS=Ricinus communis GN=RCOM_0679190 PE=3 SV=1
Gene Ontology
ID GO:0005576
description peroxidase 24-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000046_130 0.0 - - Peroxidase 27 precursor, putative [Ricinus communis]
2 Hb_002240_030 0.0040442786 - - -
3 Hb_020805_020 0.013553032 - - -
4 Hb_001433_010 0.0167512775 - - -
5 Hb_002392_060 0.044919003 - - gag/pol protein [Bryonia dioica]
6 Hb_002928_080 0.0455604318 - - PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial [Jatropha curcas]
7 Hb_100821_010 0.0508187325 - - hypothetical protein JCGZ_01613 [Jatropha curcas]
8 Hb_002495_020 0.0624231916 - - hypothetical protein EUGRSUZ_A02403, partial [Eucalyptus grandis]
9 Hb_000757_080 0.0626094622 - - vacuolar ATP synthase subunit G plant, putative [Ricinus communis]
10 Hb_181132_010 0.0660883924 - - -
11 Hb_003878_160 0.080526423 - - conserved hypothetical protein [Ricinus communis]
12 Hb_008948_030 0.0845435422 - - hypothetical protein RCOM_0224470 [Ricinus communis]
13 Hb_001488_050 0.0862329585 transcription factor TF Family: NAC PREDICTED: NAC transcription factor 29-like [Jatropha curcas]
14 Hb_003589_010 0.0867037118 - - -
15 Hb_155103_010 0.0900443244 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
16 Hb_047735_010 0.1445588965 - - DNA/RNA polymerases superfamily protein, putative [Theobroma cacao]
17 Hb_007809_070 0.2202046 - - conserved hypothetical protein [Ricinus communis]
18 Hb_022790_030 0.238979767 - - PREDICTED: probable calcium-binding protein CML18 [Jatropha curcas]
19 Hb_001948_010 0.2594327249 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
20 Hb_003102_040 0.2670190221 - - PREDICTED: AT-hook motif nuclear-localized protein 23-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000046_130 Hb_000046_130 Hb_002240_030 Hb_002240_030 Hb_000046_130--Hb_002240_030 Hb_020805_020 Hb_020805_020 Hb_000046_130--Hb_020805_020 Hb_001433_010 Hb_001433_010 Hb_000046_130--Hb_001433_010 Hb_002392_060 Hb_002392_060 Hb_000046_130--Hb_002392_060 Hb_002928_080 Hb_002928_080 Hb_000046_130--Hb_002928_080 Hb_100821_010 Hb_100821_010 Hb_000046_130--Hb_100821_010 Hb_002240_030--Hb_020805_020 Hb_002240_030--Hb_001433_010 Hb_002240_030--Hb_002392_060 Hb_002240_030--Hb_002928_080 Hb_002240_030--Hb_100821_010 Hb_020805_020--Hb_001433_010 Hb_020805_020--Hb_002392_060 Hb_020805_020--Hb_002928_080 Hb_020805_020--Hb_100821_010 Hb_001433_010--Hb_002392_060 Hb_001433_010--Hb_002928_080 Hb_001433_010--Hb_100821_010 Hb_002392_060--Hb_002928_080 Hb_002392_060--Hb_100821_010 Hb_000757_080 Hb_000757_080 Hb_002392_060--Hb_000757_080 Hb_181132_010 Hb_181132_010 Hb_002392_060--Hb_181132_010 Hb_002928_080--Hb_100821_010 Hb_002928_080--Hb_000757_080 Hb_002928_080--Hb_181132_010 Hb_100821_010--Hb_000757_080 Hb_100821_010--Hb_181132_010 Hb_003878_160 Hb_003878_160 Hb_100821_010--Hb_003878_160 Hb_008948_030 Hb_008948_030 Hb_100821_010--Hb_008948_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.011504 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00659621 0

CAGE analysis