Hb_000046_430

Information

Type -
Description -
Location Contig46: 311759-316215
Sequence    

Annotation

kegg
ID rcu:RCOM_0680220
description Lipase precursor, putative (EC:3.1.1.73)
nr
ID KDP40015.1
description hypothetical protein JCGZ_02013 [Jatropha curcas]
swissprot
ID P19515
description Lipase OS=Rhizomucor miehei PE=1 SV=2
trembl
ID A0A067L683
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02013 PE=4 SV=1
Gene Ontology
ID GO:0030600
description lipase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43648: 311794-315919
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000046_430 0.0 - - hypothetical protein JCGZ_02013 [Jatropha curcas]
2 Hb_000189_160 0.0773015587 - - PREDICTED: GDP-mannose 3,5-epimerase 2 [Eucalyptus grandis]
3 Hb_003849_030 0.0780455882 - - hypothetical protein AALP_AA5G029900 [Arabis alpina]
4 Hb_003224_010 0.0959953246 - - -
5 Hb_000689_010 0.0966728942 desease resistance Gene Name: LRR_8 PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
6 Hb_030982_050 0.0991378722 - - PREDICTED: gamma-glutamyl hydrolase 2-like [Jatropha curcas]
7 Hb_004611_050 0.1045531753 - - PREDICTED: uncharacterized protein LOC105628744 [Jatropha curcas]
8 Hb_006970_170 0.1076878626 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
9 Hb_002503_050 0.1086813321 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
10 Hb_000020_020 0.1129068148 - - hypothetical protein JCGZ_06491 [Jatropha curcas]
11 Hb_001160_020 0.1146306942 transcription factor TF Family: NF-YA Nuclear transcription factor Y subunit A-3, putative [Ricinus communis]
12 Hb_001266_130 0.1158953332 - - PREDICTED: soluble inorganic pyrophosphatase-like [Jatropha curcas]
13 Hb_002010_100 0.1163498015 - - PREDICTED: uncharacterized protein LOC105633355 [Jatropha curcas]
14 Hb_009554_030 0.1167397692 - - PREDICTED: chlorophyll synthase, chloroplastic [Prunus mume]
15 Hb_002361_010 0.1175636803 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
16 Hb_000694_050 0.1184621372 - - Nuclease PA3, putative [Ricinus communis]
17 Hb_014250_010 0.1193904551 - - PREDICTED: alpha-mannosidase-like isoform X2 [Populus euphratica]
18 Hb_010174_180 0.1195246119 - - protein binding protein, putative [Ricinus communis]
19 Hb_002078_320 0.1207714959 - - PREDICTED: glucuronoxylan 4-O-methyltransferase 1 [Jatropha curcas]
20 Hb_005496_170 0.1211286256 - - sigma factor sigb regulation protein rsbq, putative [Ricinus communis]

Gene co-expression network

sample Hb_000046_430 Hb_000046_430 Hb_000189_160 Hb_000189_160 Hb_000046_430--Hb_000189_160 Hb_003849_030 Hb_003849_030 Hb_000046_430--Hb_003849_030 Hb_003224_010 Hb_003224_010 Hb_000046_430--Hb_003224_010 Hb_000689_010 Hb_000689_010 Hb_000046_430--Hb_000689_010 Hb_030982_050 Hb_030982_050 Hb_000046_430--Hb_030982_050 Hb_004611_050 Hb_004611_050 Hb_000046_430--Hb_004611_050 Hb_000189_160--Hb_003224_010 Hb_002503_050 Hb_002503_050 Hb_000189_160--Hb_002503_050 Hb_014250_010 Hb_014250_010 Hb_000189_160--Hb_014250_010 Hb_002601_140 Hb_002601_140 Hb_000189_160--Hb_002601_140 Hb_001135_010 Hb_001135_010 Hb_000189_160--Hb_001135_010 Hb_002849_120 Hb_002849_120 Hb_003849_030--Hb_002849_120 Hb_001160_020 Hb_001160_020 Hb_003849_030--Hb_001160_020 Hb_006970_170 Hb_006970_170 Hb_003849_030--Hb_006970_170 Hb_007113_020 Hb_007113_020 Hb_003849_030--Hb_007113_020 Hb_001153_090 Hb_001153_090 Hb_003849_030--Hb_001153_090 Hb_005496_170 Hb_005496_170 Hb_003224_010--Hb_005496_170 Hb_094148_010 Hb_094148_010 Hb_003224_010--Hb_094148_010 Hb_009554_030 Hb_009554_030 Hb_003224_010--Hb_009554_030 Hb_003224_010--Hb_002503_050 Hb_000990_040 Hb_000990_040 Hb_000689_010--Hb_000990_040 Hb_000689_010--Hb_004611_050 Hb_000689_010--Hb_006970_170 Hb_000689_010--Hb_030982_050 Hb_002010_100 Hb_002010_100 Hb_000689_010--Hb_002010_100 Hb_030982_050--Hb_006970_170 Hb_106089_010 Hb_106089_010 Hb_030982_050--Hb_106089_010 Hb_142026_010 Hb_142026_010 Hb_030982_050--Hb_142026_010 Hb_000163_180 Hb_000163_180 Hb_030982_050--Hb_000163_180 Hb_001141_160 Hb_001141_160 Hb_030982_050--Hb_001141_160 Hb_093364_010 Hb_093364_010 Hb_004611_050--Hb_093364_010 Hb_004611_050--Hb_000990_040 Hb_004117_280 Hb_004117_280 Hb_004611_050--Hb_004117_280 Hb_029095_010 Hb_029095_010 Hb_004611_050--Hb_029095_010 Hb_000020_020 Hb_000020_020 Hb_004611_050--Hb_000020_020 Hb_000185_170 Hb_000185_170 Hb_004611_050--Hb_000185_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.332939 22.9783 41.0755 21.134 0.120055 0.329812
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.225592 0.0443719 0.041818 23.4937 28.0402

CAGE analysis