Hb_000048_060

Information

Type -
Description -
Location Contig48: 147433-152590
Sequence    

Annotation

kegg
ID rcu:RCOM_0430450
description adenosine diphosphatase, putative (EC:3.6.1.5)
nr
ID XP_012072645.1
description PREDICTED: probable apyrase 7 isoform X1 [Jatropha curcas]
swissprot
ID F4JSH1
description Probable apyrase 7 OS=Arabidopsis thaliana GN=APY7 PE=2 SV=1
trembl
ID A0A067KNW7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06709 PE=4 SV=1
Gene Ontology
ID GO:0016787
description probable apyrase 7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44667: 147479-149242 , PASA_asmbl_44668: 148893-149242 , PASA_asmbl_44669: 149354-152970
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000048_060 0.0 - - PREDICTED: probable apyrase 7 isoform X1 [Jatropha curcas]
2 Hb_000213_010 0.0733335302 - - PREDICTED: villin-3-like isoform X1 [Populus euphratica]
3 Hb_003994_280 0.0775278807 - - PREDICTED: uncharacterized membrane protein At1g16860-like [Jatropha curcas]
4 Hb_000696_050 0.0868878132 - - PREDICTED: CSC1-like protein At4g35870 [Jatropha curcas]
5 Hb_004531_120 0.0894414259 - - PREDICTED: uncharacterized protein LOC105635025 [Jatropha curcas]
6 Hb_001377_270 0.0955326359 - - hypothetical protein CICLE_v10021159mg [Citrus clementina]
7 Hb_123903_010 0.0979784841 transcription factor TF Family: IWS1 conserved hypothetical protein [Ricinus communis]
8 Hb_000116_500 0.0986057918 - - PREDICTED: trafficking protein particle complex subunit 11 [Jatropha curcas]
9 Hb_002495_080 0.098931256 - - PREDICTED: polygalacturonase ADPG2 [Jatropha curcas]
10 Hb_001018_130 0.1002354156 - - PREDICTED: uncharacterized protein LOC105638260 [Jatropha curcas]
11 Hb_001882_050 0.1017046739 - - hydroxysteroid dehydrogenase, putative [Ricinus communis]
12 Hb_021297_050 0.1018372025 - - PREDICTED: signal recognition particle receptor subunit alpha [Jatropha curcas]
13 Hb_002811_060 0.1027662028 - - PREDICTED: protein transport protein Sec24-like At4g32640 [Jatropha curcas]
14 Hb_002027_290 0.1034050674 - - PREDICTED: NPL4-like protein 1 [Jatropha curcas]
15 Hb_004306_080 0.1039401213 - - PREDICTED: B-cell receptor-associated protein 31 [Jatropha curcas]
16 Hb_000071_120 0.1044615153 - - PREDICTED: fasciclin-like arabinogalactan protein 4 [Jatropha curcas]
17 Hb_009529_030 0.1047975246 - - PREDICTED: transmembrane protein 120 homolog [Jatropha curcas]
18 Hb_012022_090 0.1050562461 - - PREDICTED: LIMR family protein At5g01460 [Gossypium raimondii]
19 Hb_000723_220 0.106926875 - - PREDICTED: uncharacterized protein LOC105642234 [Jatropha curcas]
20 Hb_000667_030 0.1070539104 - - PREDICTED: protein transport protein SEC23-like [Jatropha curcas]

Gene co-expression network

sample Hb_000048_060 Hb_000048_060 Hb_000213_010 Hb_000213_010 Hb_000048_060--Hb_000213_010 Hb_003994_280 Hb_003994_280 Hb_000048_060--Hb_003994_280 Hb_000696_050 Hb_000696_050 Hb_000048_060--Hb_000696_050 Hb_004531_120 Hb_004531_120 Hb_000048_060--Hb_004531_120 Hb_001377_270 Hb_001377_270 Hb_000048_060--Hb_001377_270 Hb_123903_010 Hb_123903_010 Hb_000048_060--Hb_123903_010 Hb_012022_090 Hb_012022_090 Hb_000213_010--Hb_012022_090 Hb_000029_300 Hb_000029_300 Hb_000213_010--Hb_000029_300 Hb_001221_080 Hb_001221_080 Hb_000213_010--Hb_001221_080 Hb_021297_050 Hb_021297_050 Hb_000213_010--Hb_021297_050 Hb_003683_020 Hb_003683_020 Hb_000213_010--Hb_003683_020 Hb_000116_500 Hb_000116_500 Hb_000213_010--Hb_000116_500 Hb_001640_030 Hb_001640_030 Hb_003994_280--Hb_001640_030 Hb_002631_070 Hb_002631_070 Hb_003994_280--Hb_002631_070 Hb_003994_280--Hb_000213_010 Hb_001018_110 Hb_001018_110 Hb_003994_280--Hb_001018_110 Hb_090051_030 Hb_090051_030 Hb_003994_280--Hb_090051_030 Hb_012395_140 Hb_012395_140 Hb_000696_050--Hb_012395_140 Hb_000094_310 Hb_000094_310 Hb_000696_050--Hb_000094_310 Hb_004182_050 Hb_004182_050 Hb_000696_050--Hb_004182_050 Hb_000723_220 Hb_000723_220 Hb_000696_050--Hb_000723_220 Hb_001550_060 Hb_001550_060 Hb_000696_050--Hb_001550_060 Hb_000696_050--Hb_000213_010 Hb_000680_110 Hb_000680_110 Hb_004531_120--Hb_000680_110 Hb_000139_130 Hb_000139_130 Hb_004531_120--Hb_000139_130 Hb_004109_230 Hb_004109_230 Hb_004531_120--Hb_004109_230 Hb_000062_020 Hb_000062_020 Hb_004531_120--Hb_000062_020 Hb_002284_250 Hb_002284_250 Hb_004531_120--Hb_002284_250 Hb_000130_180 Hb_000130_180 Hb_004531_120--Hb_000130_180 Hb_000080_150 Hb_000080_150 Hb_001377_270--Hb_000080_150 Hb_005269_040 Hb_005269_040 Hb_001377_270--Hb_005269_040 Hb_001538_130 Hb_001538_130 Hb_001377_270--Hb_001538_130 Hb_000347_180 Hb_000347_180 Hb_001377_270--Hb_000347_180 Hb_000608_320 Hb_000608_320 Hb_001377_270--Hb_000608_320 Hb_000366_120 Hb_000366_120 Hb_001377_270--Hb_000366_120 Hb_143629_110 Hb_143629_110 Hb_123903_010--Hb_143629_110 Hb_009175_020 Hb_009175_020 Hb_123903_010--Hb_009175_020 Hb_002815_030 Hb_002815_030 Hb_123903_010--Hb_002815_030 Hb_000975_040 Hb_000975_040 Hb_123903_010--Hb_000975_040 Hb_000390_320 Hb_000390_320 Hb_123903_010--Hb_000390_320 Hb_032202_200 Hb_032202_200 Hb_123903_010--Hb_032202_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.8118 4.71637 2.14365 8.728 7.41368 5.60026
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.2271 3.24343 5.49825 4.70956 5.1677

CAGE analysis