Hb_000049_320

Information

Type -
Description -
Location Contig49: 331896-333088
Sequence    

Annotation

kegg
ID rcu:RCOM_1723770
description monooxygenase, putative (EC:1.14.13.8)
nr
ID XP_012085185.1
description PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA5 [Jatropha curcas]
swissprot
ID Q9SVU0
description Probable indole-3-pyruvate monooxygenase YUCCA8 OS=Arabidopsis thaliana GN=YUC8 PE=2 SV=1
trembl
ID A0A067K3P7
description Flavin-containing monooxygenase OS=Jatropha curcas GN=JCGZ_17597 PE=3 SV=1
Gene Ontology
ID GO:0004499
description probable indole-3-pyruvate monooxygenase yucca8

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000049_320 0.0 - - PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA5 [Jatropha curcas]
2 Hb_003486_040 0.0009453296 - - PREDICTED: glutamic acid-rich protein-like [Jatropha curcas]
3 Hb_000373_090 0.0012854417 - - PREDICTED: abscisic acid 8'-hydroxylase 3-like [Prunus mume]
4 Hb_000834_120 0.002670847 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP8 [Populus euphratica]
5 Hb_008686_050 0.0048076733 - - -
6 Hb_004881_090 0.0051519263 - - hypothetical protein POPTR_0002s06050g [Populus trichocarpa]
7 Hb_006111_050 0.0094252675 transcription factor TF Family: AP2 Protein AINTEGUMENTA, putative [Ricinus communis]
8 Hb_000172_040 0.0115060242 - - Tetratricopeptide repeat protein, putative [Ricinus communis]
9 Hb_126871_010 0.011931721 - - PREDICTED: probable protein phosphatase 2C 38 [Jatropha curcas]
10 Hb_009615_140 0.0122456502 - - PREDICTED: alpha-galactosidase-like isoform X2 [Pyrus x bretschneideri]
11 Hb_039046_010 0.0138919465 - - PREDICTED: uncharacterized protein LOC105644040 isoform X2 [Jatropha curcas]
12 Hb_003914_040 0.0169049282 - - hypothetical protein EUGRSUZ_H02626 [Eucalyptus grandis]
13 Hb_007040_020 0.0169124846 - - -
14 Hb_000295_150 0.0177138947 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
15 Hb_004324_180 0.0191096994 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
16 Hb_008895_010 0.0204518834 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000125_050 0.0222335754 - - -
18 Hb_000494_140 0.0237914974 transcription factor TF Family: ERF hypothetical protein JCGZ_14625 [Jatropha curcas]
19 Hb_000039_130 0.0259076083 - - -
20 Hb_053709_020 0.0278667478 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]

Gene co-expression network

sample Hb_000049_320 Hb_000049_320 Hb_003486_040 Hb_003486_040 Hb_000049_320--Hb_003486_040 Hb_000373_090 Hb_000373_090 Hb_000049_320--Hb_000373_090 Hb_000834_120 Hb_000834_120 Hb_000049_320--Hb_000834_120 Hb_008686_050 Hb_008686_050 Hb_000049_320--Hb_008686_050 Hb_004881_090 Hb_004881_090 Hb_000049_320--Hb_004881_090 Hb_006111_050 Hb_006111_050 Hb_000049_320--Hb_006111_050 Hb_003486_040--Hb_000373_090 Hb_003486_040--Hb_000834_120 Hb_003486_040--Hb_004881_090 Hb_003486_040--Hb_008686_050 Hb_003486_040--Hb_006111_050 Hb_000373_090--Hb_000834_120 Hb_000373_090--Hb_004881_090 Hb_000373_090--Hb_008686_050 Hb_000373_090--Hb_006111_050 Hb_000834_120--Hb_004881_090 Hb_000834_120--Hb_006111_050 Hb_000834_120--Hb_008686_050 Hb_008686_050--Hb_004881_090 Hb_003914_040 Hb_003914_040 Hb_008686_050--Hb_003914_040 Hb_004881_090--Hb_006111_050 Hb_000172_040 Hb_000172_040 Hb_004881_090--Hb_000172_040 Hb_006111_050--Hb_000172_040 Hb_126871_010 Hb_126871_010 Hb_006111_050--Hb_126871_010 Hb_009615_140 Hb_009615_140 Hb_006111_050--Hb_009615_140 Hb_039046_010 Hb_039046_010 Hb_006111_050--Hb_039046_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0159222 0.0482869 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis