Hb_000053_010

Information

Type -
Description -
Location Contig53: 31919-32584
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa017696mg
description hypothetical protein
nr
ID XP_007210047.1
description hypothetical protein PRUPE_ppa017696mg [Prunus persica]
swissprot
ID Q9M9A5
description Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis thaliana GN=PCR6 PE=2 SV=1
trembl
ID M5WD71
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017696mg PE=4 SV=1
Gene Ontology
ID GO:0005886
description cell number regulator 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000053_010 0.0 - - hypothetical protein PRUPE_ppa017696mg [Prunus persica]
2 Hb_002434_040 0.0060370901 - - hypothetical protein CICLE_v10022672mg [Citrus clementina]
3 Hb_023313_050 0.0127812532 transcription factor TF Family: Rcd1-like PREDICTED: cell differentiation protein rcd1-like [Jatropha curcas]
4 Hb_014361_160 0.0243428912 transcription factor TF Family: GRAS SCL domain class transcription factor [Theobroma cacao]
5 Hb_000977_250 0.0264687952 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
6 Hb_171810_030 0.0303467995 - - PREDICTED: oligopeptide transporter 6-like [Jatropha curcas]
7 Hb_011433_010 0.0374178506 - - PREDICTED: (R)-mandelonitrile lyase-like [Populus euphratica]
8 Hb_003605_170 0.0394547377 - - hypothetical protein POPTR_0013s12020g [Populus trichocarpa]
9 Hb_001170_020 0.0420205076 - - conserved hypothetical protein [Ricinus communis]
10 Hb_040323_010 0.0448848539 - - -
11 Hb_003836_040 0.0462299764 - - PREDICTED: cytochrome P450 77A3-like [Jatropha curcas]
12 Hb_000210_020 0.0471465459 transcription factor TF Family: OFP Ovate family protein 13, putative [Theobroma cacao]
13 Hb_000297_190 0.0489793972 - - cell wall invertase [Manihot esculenta]
14 Hb_005797_020 0.0491160669 - - PREDICTED: BAG family molecular chaperone regulator 1-like [Jatropha curcas]
15 Hb_099182_010 0.0505127757 - - PREDICTED: uncharacterized protein LOC101214783 [Cucumis sativus]
16 Hb_003392_060 0.0520934351 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
17 Hb_005888_020 0.0552080914 - - PREDICTED: uncharacterized protein LOC105127729 [Populus euphratica]
18 Hb_003050_380 0.0560527413 - - hypothetical protein POPTR_0007s03380g [Populus trichocarpa]
19 Hb_008484_080 0.058368426 - - PREDICTED: crocetin glucosyltransferase, chloroplastic-like [Jatropha curcas]
20 Hb_004724_440 0.0634844695 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000053_010 Hb_000053_010 Hb_002434_040 Hb_002434_040 Hb_000053_010--Hb_002434_040 Hb_023313_050 Hb_023313_050 Hb_000053_010--Hb_023313_050 Hb_014361_160 Hb_014361_160 Hb_000053_010--Hb_014361_160 Hb_000977_250 Hb_000977_250 Hb_000053_010--Hb_000977_250 Hb_171810_030 Hb_171810_030 Hb_000053_010--Hb_171810_030 Hb_011433_010 Hb_011433_010 Hb_000053_010--Hb_011433_010 Hb_002434_040--Hb_023313_050 Hb_002434_040--Hb_000977_250 Hb_002434_040--Hb_014361_160 Hb_002434_040--Hb_171810_030 Hb_040323_010 Hb_040323_010 Hb_002434_040--Hb_040323_010 Hb_023313_050--Hb_000977_250 Hb_023313_050--Hb_171810_030 Hb_023313_050--Hb_014361_160 Hb_099182_010 Hb_099182_010 Hb_023313_050--Hb_099182_010 Hb_014361_160--Hb_171810_030 Hb_014361_160--Hb_011433_010 Hb_003392_060 Hb_003392_060 Hb_014361_160--Hb_003392_060 Hb_001170_020 Hb_001170_020 Hb_000977_250--Hb_001170_020 Hb_003605_170 Hb_003605_170 Hb_000977_250--Hb_003605_170 Hb_000977_250--Hb_014361_160 Hb_171810_030--Hb_040323_010 Hb_171810_030--Hb_003392_060 Hb_005797_020 Hb_005797_020 Hb_011433_010--Hb_005797_020 Hb_011433_010--Hb_003392_060 Hb_000414_040 Hb_000414_040 Hb_011433_010--Hb_000414_040 Hb_011433_010--Hb_171810_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 3.35739 0.575673 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 3.27809

CAGE analysis