Hb_000054_010

Information

Type -
Description -
Location Contig54: 4953-9076
Sequence    

Annotation

kegg
ID rcu:RCOM_0456610
description hypothetical protein
nr
ID XP_012076080.1
description PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KQ67
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11916 PE=4 SV=1
Gene Ontology
ID GO:0016757
description o-fucosyltransferase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000054_010 0.0 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
2 Hb_030565_100 0.1287942723 - - serine hydroxymethyltransferase, putative [Ricinus communis]
3 Hb_010883_180 0.1330153631 transcription factor TF Family: CSD PREDICTED: glycine-rich protein 2-like [Jatropha curcas]
4 Hb_001186_110 0.1359715614 - - hypothetical protein JCGZ_18389 [Jatropha curcas]
5 Hb_007311_050 0.1400080444 - - conserved hypothetical protein [Ricinus communis]
6 Hb_174541_030 0.1423850984 - - Cytochrome P450, family 98, subfamily A, polypeptide 3 [Theobroma cacao]
7 Hb_007574_040 0.1428871306 - - PREDICTED: uncharacterized protein LOC105638144 [Jatropha curcas]
8 Hb_000030_130 0.143713813 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
9 Hb_000297_140 0.1532346696 - - hypothetical protein RCOM_0293450 [Ricinus communis]
10 Hb_000077_100 0.1588046427 - - PREDICTED: mannan endo-1,4-beta-mannosidase 2-like isoform X1 [Jatropha curcas]
11 Hb_000455_070 0.1595790071 - - PREDICTED: LOW QUALITY PROTEIN: carboxymethylenebutenolidase homolog [Jatropha curcas]
12 Hb_000462_070 0.1604148126 - - PREDICTED: probable pectinesterase 15 [Jatropha curcas]
13 Hb_000622_120 0.1605925617 - - hypothetical protein [Hevea brasiliensis]
14 Hb_000622_190 0.16093436 - - PREDICTED: uncharacterized protein LOC105642890 [Jatropha curcas]
15 Hb_000246_130 0.163028387 - - tubulin alpha chain, putative [Ricinus communis]
16 Hb_000997_080 0.1670874781 - - PREDICTED: protein WVD2-like 1 isoform X1 [Jatropha curcas]
17 Hb_102772_010 0.1679099339 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000482_080 0.1692481944 - - PREDICTED: uncharacterized protein LOC105638144 [Jatropha curcas]
19 Hb_000115_200 0.1696303963 - - PREDICTED: endonuclease 2 [Jatropha curcas]
20 Hb_012395_250 0.1734048092 - - hypothetical protein RCOM_1217340 [Ricinus communis]

Gene co-expression network

sample Hb_000054_010 Hb_000054_010 Hb_030565_100 Hb_030565_100 Hb_000054_010--Hb_030565_100 Hb_010883_180 Hb_010883_180 Hb_000054_010--Hb_010883_180 Hb_001186_110 Hb_001186_110 Hb_000054_010--Hb_001186_110 Hb_007311_050 Hb_007311_050 Hb_000054_010--Hb_007311_050 Hb_174541_030 Hb_174541_030 Hb_000054_010--Hb_174541_030 Hb_007574_040 Hb_007574_040 Hb_000054_010--Hb_007574_040 Hb_000077_100 Hb_000077_100 Hb_030565_100--Hb_000077_100 Hb_029223_040 Hb_029223_040 Hb_030565_100--Hb_029223_040 Hb_000236_180 Hb_000236_180 Hb_030565_100--Hb_000236_180 Hb_030565_100--Hb_174541_030 Hb_003470_110 Hb_003470_110 Hb_030565_100--Hb_003470_110 Hb_000297_140 Hb_000297_140 Hb_030565_100--Hb_000297_140 Hb_002316_080 Hb_002316_080 Hb_010883_180--Hb_002316_080 Hb_010883_180--Hb_030565_100 Hb_000260_110 Hb_000260_110 Hb_010883_180--Hb_000260_110 Hb_103942_030 Hb_103942_030 Hb_010883_180--Hb_103942_030 Hb_000086_090 Hb_000086_090 Hb_010883_180--Hb_000086_090 Hb_003001_050 Hb_003001_050 Hb_001186_110--Hb_003001_050 Hb_000455_070 Hb_000455_070 Hb_001186_110--Hb_000455_070 Hb_002203_020 Hb_002203_020 Hb_001186_110--Hb_002203_020 Hb_000300_420 Hb_000300_420 Hb_001186_110--Hb_000300_420 Hb_001186_110--Hb_174541_030 Hb_000622_190 Hb_000622_190 Hb_007311_050--Hb_000622_190 Hb_000482_080 Hb_000482_080 Hb_007311_050--Hb_000482_080 Hb_102772_010 Hb_102772_010 Hb_007311_050--Hb_102772_010 Hb_003020_200 Hb_003020_200 Hb_007311_050--Hb_003020_200 Hb_000637_100 Hb_000637_100 Hb_007311_050--Hb_000637_100 Hb_004117_020 Hb_004117_020 Hb_174541_030--Hb_004117_020 Hb_000457_120 Hb_000457_120 Hb_174541_030--Hb_000457_120 Hb_000030_130 Hb_000030_130 Hb_174541_030--Hb_000030_130 Hb_174541_030--Hb_002203_020 Hb_000392_540 Hb_000392_540 Hb_174541_030--Hb_000392_540 Hb_007574_040--Hb_000297_140 Hb_008695_220 Hb_008695_220 Hb_007574_040--Hb_008695_220 Hb_000622_120 Hb_000622_120 Hb_007574_040--Hb_000622_120 Hb_002759_030 Hb_002759_030 Hb_007574_040--Hb_002759_030 Hb_007574_040--Hb_000622_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.25152 6.86649 18.6051 172.285 3.55292 1.32058
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.65234 4.16322 6.73589 11.312 41.8093

CAGE analysis