Hb_000057_200

Information

Type -
Description -
Location Contig57: 251261-256213
Sequence    

Annotation

kegg
ID cit:102613007
description methyltransferase-like protein 22-like
nr
ID XP_012073342.1
description PREDICTED: methyltransferase-like protein 22 [Jatropha curcas]
swissprot
ID Q8R1C6
description Methyltransferase-like protein 22 OS=Mus musculus GN=Mettl22 PE=2 SV=1
trembl
ID A0A067KYB2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06276 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49311: 254280-255489 , PASA_asmbl_49312: 254333-254807 , PASA_asmbl_49313: 256055-256424
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000057_200 0.0 - - PREDICTED: methyltransferase-like protein 22 [Jatropha curcas]
2 Hb_004223_090 0.0716495402 transcription factor TF Family: E2F-DP PREDICTED: transcription factor E2FC isoform X2 [Jatropha curcas]
3 Hb_185830_020 0.0776809608 - - ABC transporter family protein [Hevea brasiliensis]
4 Hb_039946_020 0.0779913098 - - conserved hypothetical protein [Ricinus communis]
5 Hb_033642_010 0.0832917866 - - PREDICTED: protection of telomeres protein 1a-like isoform X2 [Jatropha curcas]
6 Hb_005539_030 0.0858642086 - - PREDICTED: ubiquitin-like-specific protease 1D isoform X2 [Jatropha curcas]
7 Hb_002079_010 0.0873666736 - - hypothetical protein POPTR_0001s01970g [Populus trichocarpa]
8 Hb_012022_030 0.0912211828 transcription factor TF Family: Alfin-like phd/F-box containing protein, putative [Ricinus communis]
9 Hb_063090_010 0.0912539456 - - PREDICTED: ultraviolet-B receptor UVR8 isoform X2 [Jatropha curcas]
10 Hb_002137_020 0.091404776 - - ubiquitin-protein ligase, putative [Ricinus communis]
11 Hb_004970_110 0.0914320075 - - PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Jatropha curcas]
12 Hb_000103_180 0.0921130987 - - PREDICTED: stress-induced-phosphoprotein 1 [Jatropha curcas]
13 Hb_000205_160 0.0922100066 - - Peroxisome biogenesis protein 12 [Morus notabilis]
14 Hb_003777_270 0.0923374787 - - 60S ribosomal protein L3B [Hevea brasiliensis]
15 Hb_022250_130 0.0927743667 - - inositol hexaphosphate kinase, putative [Ricinus communis]
16 Hb_015292_030 0.0929025699 - - PREDICTED: pentatricopeptide repeat-containing protein At3g02490, mitochondrial [Jatropha curcas]
17 Hb_003728_030 0.0933258837 - - o-sialoglycoprotein endopeptidase, putative [Ricinus communis]
18 Hb_001279_140 0.0942295095 - - PREDICTED: cystinosin homolog [Jatropha curcas]
19 Hb_002030_030 0.0961694129 - - PREDICTED: GLABRA2 expression modulator [Jatropha curcas]
20 Hb_001489_150 0.0965126343 - - PREDICTED: uncharacterized protein LOC105123623 isoform X2 [Populus euphratica]

Gene co-expression network

sample Hb_000057_200 Hb_000057_200 Hb_004223_090 Hb_004223_090 Hb_000057_200--Hb_004223_090 Hb_185830_020 Hb_185830_020 Hb_000057_200--Hb_185830_020 Hb_039946_020 Hb_039946_020 Hb_000057_200--Hb_039946_020 Hb_033642_010 Hb_033642_010 Hb_000057_200--Hb_033642_010 Hb_005539_030 Hb_005539_030 Hb_000057_200--Hb_005539_030 Hb_002079_010 Hb_002079_010 Hb_000057_200--Hb_002079_010 Hb_003777_270 Hb_003777_270 Hb_004223_090--Hb_003777_270 Hb_000923_020 Hb_000923_020 Hb_004223_090--Hb_000923_020 Hb_000099_240 Hb_000099_240 Hb_004223_090--Hb_000099_240 Hb_004223_090--Hb_039946_020 Hb_003159_080 Hb_003159_080 Hb_004223_090--Hb_003159_080 Hb_003847_080 Hb_003847_080 Hb_185830_020--Hb_003847_080 Hb_010691_060 Hb_010691_060 Hb_185830_020--Hb_010691_060 Hb_002982_040 Hb_002982_040 Hb_185830_020--Hb_002982_040 Hb_000956_030 Hb_000956_030 Hb_185830_020--Hb_000956_030 Hb_000103_180 Hb_000103_180 Hb_185830_020--Hb_000103_180 Hb_022250_130 Hb_022250_130 Hb_185830_020--Hb_022250_130 Hb_012022_030 Hb_012022_030 Hb_039946_020--Hb_012022_030 Hb_000629_010 Hb_000629_010 Hb_039946_020--Hb_000629_010 Hb_000062_240 Hb_000062_240 Hb_039946_020--Hb_000062_240 Hb_003615_010 Hb_003615_010 Hb_039946_020--Hb_003615_010 Hb_002026_180 Hb_002026_180 Hb_039946_020--Hb_002026_180 Hb_028872_140 Hb_028872_140 Hb_033642_010--Hb_028872_140 Hb_009111_050 Hb_009111_050 Hb_033642_010--Hb_009111_050 Hb_002030_030 Hb_002030_030 Hb_033642_010--Hb_002030_030 Hb_001720_050 Hb_001720_050 Hb_033642_010--Hb_001720_050 Hb_033642_010--Hb_000062_240 Hb_033642_010--Hb_003777_270 Hb_000169_010 Hb_000169_010 Hb_005539_030--Hb_000169_010 Hb_004970_110 Hb_004970_110 Hb_005539_030--Hb_004970_110 Hb_000483_360 Hb_000483_360 Hb_005539_030--Hb_000483_360 Hb_004048_070 Hb_004048_070 Hb_005539_030--Hb_004048_070 Hb_000638_080 Hb_000638_080 Hb_005539_030--Hb_000638_080 Hb_007254_040 Hb_007254_040 Hb_005539_030--Hb_007254_040 Hb_002079_010--Hb_000103_180 Hb_002079_010--Hb_002030_030 Hb_007426_030 Hb_007426_030 Hb_002079_010--Hb_007426_030 Hb_006400_060 Hb_006400_060 Hb_002079_010--Hb_006400_060 Hb_063090_010 Hb_063090_010 Hb_002079_010--Hb_063090_010 Hb_000179_020 Hb_000179_020 Hb_002079_010--Hb_000179_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.58564 2.61999 1.54401 1.69344 4.47097 7.79284
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.1157 4.54239 4.17829 4.68295 1.23285

CAGE analysis