Hb_000060_080

Information

Type transcription factor
Description TF Family: BES1
Location Contig60: 85225-89058
Sequence    

Annotation

kegg
ID rcu:RCOM_1252040
description BRASSINAZOLE-RESISTANT 2 protein, putative
nr
ID XP_002522271.1
description BRASSINAZOLE-RESISTANT 2 protein, putative [Ricinus communis]
swissprot
ID Q9ZV88
description BES1/BZR1 homolog protein 4 OS=Arabidopsis thaliana GN=BEH4 PE=1 SV=1
trembl
ID B9S8F2
description BRASSINAZOLE-RESISTANT 2 protein, putative OS=Ricinus communis GN=RCOM_1252040 PE=4 SV=1
Gene Ontology
ID GO:0001101
description bes1 bzr1 homolog protein 4-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50546: 87091-87325 , PASA_asmbl_50547: 88017-88495
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000060_080 0.0 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 2 protein, putative [Ricinus communis]
2 Hb_170632_010 0.0654576951 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
3 Hb_002676_110 0.096405062 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase 2-like [Gossypium raimondii]
4 Hb_001663_090 0.0993019301 - - ribonuclease t2, putative [Ricinus communis]
5 Hb_001562_030 0.101297155 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH35 isoform X1 [Jatropha curcas]
6 Hb_004631_100 0.1052627245 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH96 [Jatropha curcas]
7 Hb_000975_090 0.1066739286 - - Zeamatin precursor, putative [Ricinus communis]
8 Hb_001198_180 0.1076492085 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
9 Hb_004096_140 0.1136615406 - - Lipase, putative [Ricinus communis]
10 Hb_006721_060 0.1146891868 - - RnaseH (mitochondrion) [Malus domestica]
11 Hb_002739_160 0.1207838575 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
12 Hb_000635_190 0.1213099076 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103322127 [Prunus mume]
13 Hb_030827_080 0.1220698629 - - PREDICTED: uncharacterized protein LOC105648491 [Jatropha curcas]
14 Hb_023386_060 0.1309615425 - - PREDICTED: putative glucuronosyltransferase PGSIP8 [Jatropha curcas]
15 Hb_038718_010 0.1314913932 - - Disease resistance protein RFL1, putative [Ricinus communis]
16 Hb_096878_010 0.1359398146 - - hypothetical protein POPTR_0112s002001g, partial [Populus trichocarpa]
17 Hb_029622_090 0.1374429779 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2-like [Jatropha curcas]
18 Hb_010642_010 0.1376450345 - - PREDICTED: aquaporin TIP2-1 [Jatropha curcas]
19 Hb_008806_040 0.137943965 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
20 Hb_000465_350 0.1386624091 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2 [Jatropha curcas]

Gene co-expression network

sample Hb_000060_080 Hb_000060_080 Hb_170632_010 Hb_170632_010 Hb_000060_080--Hb_170632_010 Hb_002676_110 Hb_002676_110 Hb_000060_080--Hb_002676_110 Hb_001663_090 Hb_001663_090 Hb_000060_080--Hb_001663_090 Hb_001562_030 Hb_001562_030 Hb_000060_080--Hb_001562_030 Hb_004631_100 Hb_004631_100 Hb_000060_080--Hb_004631_100 Hb_000975_090 Hb_000975_090 Hb_000060_080--Hb_000975_090 Hb_170632_010--Hb_000975_090 Hb_001198_180 Hb_001198_180 Hb_170632_010--Hb_001198_180 Hb_038718_010 Hb_038718_010 Hb_170632_010--Hb_038718_010 Hb_170632_010--Hb_001663_090 Hb_170632_010--Hb_002676_110 Hb_002676_110--Hb_001663_090 Hb_076771_010 Hb_076771_010 Hb_002676_110--Hb_076771_010 Hb_002676_110--Hb_004631_100 Hb_010721_010 Hb_010721_010 Hb_002676_110--Hb_010721_010 Hb_070634_010 Hb_070634_010 Hb_002676_110--Hb_070634_010 Hb_029622_090 Hb_029622_090 Hb_001663_090--Hb_029622_090 Hb_000028_330 Hb_000028_330 Hb_001663_090--Hb_000028_330 Hb_002739_160 Hb_002739_160 Hb_001663_090--Hb_002739_160 Hb_030827_080 Hb_030827_080 Hb_001663_090--Hb_030827_080 Hb_001562_030--Hb_001198_180 Hb_002888_100 Hb_002888_100 Hb_001562_030--Hb_002888_100 Hb_008725_020 Hb_008725_020 Hb_001562_030--Hb_008725_020 Hb_001562_030--Hb_002739_160 Hb_092975_010 Hb_092975_010 Hb_001562_030--Hb_092975_010 Hb_001562_030--Hb_030827_080 Hb_033053_020 Hb_033053_020 Hb_004631_100--Hb_033053_020 Hb_004631_100--Hb_002888_100 Hb_004659_100 Hb_004659_100 Hb_004631_100--Hb_004659_100 Hb_000111_120 Hb_000111_120 Hb_004631_100--Hb_000111_120 Hb_006916_120 Hb_006916_120 Hb_000975_090--Hb_006916_120 Hb_133508_020 Hb_133508_020 Hb_000975_090--Hb_133508_020 Hb_000631_100 Hb_000631_100 Hb_000975_090--Hb_000631_100 Hb_000975_090--Hb_001562_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0444259 11.4602 12.749 19.5224 0 0.0126388
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.20741 0.957879

CAGE analysis