Hb_000061_020

Information

Type -
Description -
Location Contig61: 12915-16519
Sequence    

Annotation

kegg
ID tcc:TCM_014060
description Uncharacterized protein isoform 1
nr
ID XP_012080292.1
description PREDICTED: uncharacterized endoplasmic reticulum membrane protein C16E8.02 [Jatropha curcas]
swissprot
ID O13737
description Uncharacterized endoplasmic reticulum membrane protein C16E8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC16E8.02 PE=4 SV=2
trembl
ID A0A067K4Z0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11647 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50900: 12856-17395
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000061_020 0.0 - - PREDICTED: uncharacterized endoplasmic reticulum membrane protein C16E8.02 [Jatropha curcas]
2 Hb_003462_070 0.0653356846 - - arsenical pump-driving atpase, putative [Ricinus communis]
3 Hb_025557_050 0.0826451312 - - PREDICTED: pentatricopeptide repeat-containing protein At1g74630 [Jatropha curcas]
4 Hb_021943_080 0.0911045419 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ASHH3 isoform X1 [Jatropha curcas]
5 Hb_000723_100 0.0971719314 - - phosphoglycerate kinase, putative [Ricinus communis]
6 Hb_002304_060 0.0977984736 - - PREDICTED: glucosidase 2 subunit beta [Jatropha curcas]
7 Hb_017151_010 0.0983654386 - - PREDICTED: uncharacterized protein LOC105641966 [Jatropha curcas]
8 Hb_031284_010 0.0984430559 - - PREDICTED: uncharacterized protein LOC105633543 [Jatropha curcas]
9 Hb_001205_300 0.1000422263 - - glutamyl-tRNA synthetase 1, 2, putative [Ricinus communis]
10 Hb_002811_160 0.1010808647 - - PREDICTED: pollen-specific protein SF21-like isoform X1 [Jatropha curcas]
11 Hb_000679_020 0.1025472602 transcription factor TF Family: HB PREDICTED: transcription initiation factor TFIID subunit 11 [Jatropha curcas]
12 Hb_001660_120 0.1032114704 - - PREDICTED: adenylate kinase, chloroplastic [Jatropha curcas]
13 Hb_004032_410 0.1047783617 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 5 isoform X2 [Jatropha curcas]
14 Hb_000563_420 0.1055816808 - - PREDICTED: acyl-CoA dehydrogenase family member 10 [Jatropha curcas]
15 Hb_001089_070 0.106014398 - - PREDICTED: conserved oligomeric Golgi complex subunit 3 [Jatropha curcas]
16 Hb_001604_120 0.1061682255 - - PREDICTED: hemK methyltransferase family member 1 isoform X2 [Jatropha curcas]
17 Hb_000920_030 0.1063799165 - - short chain alcohol dehydrogenase, putative [Ricinus communis]
18 Hb_000864_030 0.1064833892 - - PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1 isoform X2 [Jatropha curcas]
19 Hb_004218_280 0.1082211193 - - Exoenzymes regulatory protein aepA precursor, putative [Ricinus communis]
20 Hb_000015_100 0.1090003417 - - PREDICTED: probable methionine--tRNA ligase, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_000061_020 Hb_000061_020 Hb_003462_070 Hb_003462_070 Hb_000061_020--Hb_003462_070 Hb_025557_050 Hb_025557_050 Hb_000061_020--Hb_025557_050 Hb_021943_080 Hb_021943_080 Hb_000061_020--Hb_021943_080 Hb_000723_100 Hb_000723_100 Hb_000061_020--Hb_000723_100 Hb_002304_060 Hb_002304_060 Hb_000061_020--Hb_002304_060 Hb_017151_010 Hb_017151_010 Hb_000061_020--Hb_017151_010 Hb_001205_300 Hb_001205_300 Hb_003462_070--Hb_001205_300 Hb_000920_030 Hb_000920_030 Hb_003462_070--Hb_000920_030 Hb_000740_050 Hb_000740_050 Hb_003462_070--Hb_000740_050 Hb_009225_020 Hb_009225_020 Hb_003462_070--Hb_009225_020 Hb_003462_070--Hb_021943_080 Hb_025557_050--Hb_017151_010 Hb_001789_190 Hb_001789_190 Hb_025557_050--Hb_001789_190 Hb_010812_050 Hb_010812_050 Hb_025557_050--Hb_010812_050 Hb_008059_010 Hb_008059_010 Hb_025557_050--Hb_008059_010 Hb_004097_070 Hb_004097_070 Hb_025557_050--Hb_004097_070 Hb_031284_010 Hb_031284_010 Hb_025557_050--Hb_031284_010 Hb_001158_160 Hb_001158_160 Hb_021943_080--Hb_001158_160 Hb_000120_210 Hb_000120_210 Hb_021943_080--Hb_000120_210 Hb_001089_070 Hb_001089_070 Hb_021943_080--Hb_001089_070 Hb_016777_040 Hb_016777_040 Hb_021943_080--Hb_016777_040 Hb_004096_240 Hb_004096_240 Hb_021943_080--Hb_004096_240 Hb_077026_010 Hb_077026_010 Hb_021943_080--Hb_077026_010 Hb_003440_060 Hb_003440_060 Hb_000723_100--Hb_003440_060 Hb_002893_070 Hb_002893_070 Hb_000723_100--Hb_002893_070 Hb_004310_140 Hb_004310_140 Hb_000723_100--Hb_004310_140 Hb_000665_160 Hb_000665_160 Hb_000723_100--Hb_000665_160 Hb_000723_100--Hb_000740_050 Hb_002374_260 Hb_002374_260 Hb_002304_060--Hb_002374_260 Hb_000917_320 Hb_000917_320 Hb_002304_060--Hb_000917_320 Hb_001377_110 Hb_001377_110 Hb_002304_060--Hb_001377_110 Hb_004800_180 Hb_004800_180 Hb_002304_060--Hb_004800_180 Hb_000224_150 Hb_000224_150 Hb_002304_060--Hb_000224_150 Hb_000085_140 Hb_000085_140 Hb_002304_060--Hb_000085_140 Hb_053079_020 Hb_053079_020 Hb_017151_010--Hb_053079_020 Hb_017151_010--Hb_001789_190 Hb_000115_280 Hb_000115_280 Hb_017151_010--Hb_000115_280 Hb_001619_050 Hb_001619_050 Hb_017151_010--Hb_001619_050 Hb_032202_080 Hb_032202_080 Hb_017151_010--Hb_032202_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
22.5668 9.37862 25.6162 15.301 24.669 17.4191
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.7092 11.4296 7.19786 14.5654 31.0842

CAGE analysis