Hb_000061_040

Information

Type -
Description -
Location Contig61: 24633-25617
Sequence    

Annotation

kegg
ID tcc:TCM_014073
description NAC domain protein, IPR003441
nr
ID XP_012080293.1
description PREDICTED: NAC domain-containing protein 100 [Jatropha curcas]
swissprot
ID Q9FLJ2
description NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1
trembl
ID R4N7I9
description NAC transcription factor 002 OS=Jatropha curcas GN=JCGZ_11649 PE=4 SV=1
Gene Ontology
ID GO:0005634
description nac domain-containing protein 100-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000061_040 0.0 - - PREDICTED: NAC domain-containing protein 100 [Jatropha curcas]
2 Hb_003929_060 0.1409777156 - - PREDICTED: uncharacterized protein ECU03_1610 [Jatropha curcas]
3 Hb_114261_010 0.2041969631 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 100 [Jatropha curcas]
4 Hb_000160_200 0.2397895826 - - PREDICTED: uncharacterized protein LOC105648226 [Jatropha curcas]
5 Hb_000828_040 0.2400847243 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
6 Hb_000861_030 0.2539761908 - - -
7 Hb_004883_060 0.2589324495 - - PREDICTED: uncharacterized protein LOC105647345 isoform X1 [Jatropha curcas]
8 Hb_003978_010 0.2666904265 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
9 Hb_000891_040 0.2790140061 - - hypothetical protein JCGZ_11252 [Jatropha curcas]
10 Hb_001396_150 0.2890058715 transcription factor TF Family: M-type hypothetical protein POPTR_0001s13660g [Populus trichocarpa]
11 Hb_003061_010 0.2905810688 - - hypothetical protein SORBIDRAFT_01g039870 [Sorghum bicolor]
12 Hb_056506_060 0.2936325273 - - hypothetical protein B456_007G294000 [Gossypium raimondii]
13 Hb_002918_090 0.2954911327 - - PREDICTED: auxin-repressed 12.5 kDa protein-like [Nelumbo nucifera]
14 Hb_087762_010 0.2959514379 - - thioredoxin-like family protein [Hevea brasiliensis]
15 Hb_000122_140 0.2963514254 - - -
16 Hb_067466_010 0.2973034777 - - ankyrin repeat protein [Bruguiera gymnorhiza]
17 Hb_000230_040 0.2977896378 - - PREDICTED: protein MON2 homolog isoform X2 [Vitis vinifera]
18 Hb_000193_150 0.3067081486 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 100 [Jatropha curcas]
19 Hb_080530_020 0.3073895369 - - -
20 Hb_116681_010 0.3083727038 - - hypothetical protein PRUPE_ppa025968mg, partial [Prunus persica]

Gene co-expression network

sample Hb_000061_040 Hb_000061_040 Hb_003929_060 Hb_003929_060 Hb_000061_040--Hb_003929_060 Hb_114261_010 Hb_114261_010 Hb_000061_040--Hb_114261_010 Hb_000160_200 Hb_000160_200 Hb_000061_040--Hb_000160_200 Hb_000828_040 Hb_000828_040 Hb_000061_040--Hb_000828_040 Hb_000861_030 Hb_000861_030 Hb_000061_040--Hb_000861_030 Hb_004883_060 Hb_004883_060 Hb_000061_040--Hb_004883_060 Hb_003929_060--Hb_114261_010 Hb_005389_110 Hb_005389_110 Hb_003929_060--Hb_005389_110 Hb_003929_060--Hb_000828_040 Hb_002235_140 Hb_002235_140 Hb_003929_060--Hb_002235_140 Hb_003929_060--Hb_000160_200 Hb_114261_010--Hb_000160_200 Hb_001023_020 Hb_001023_020 Hb_114261_010--Hb_001023_020 Hb_001396_150 Hb_001396_150 Hb_114261_010--Hb_001396_150 Hb_000270_500 Hb_000270_500 Hb_114261_010--Hb_000270_500 Hb_000160_200--Hb_000270_500 Hb_002243_040 Hb_002243_040 Hb_000160_200--Hb_002243_040 Hb_116681_010 Hb_116681_010 Hb_000160_200--Hb_116681_010 Hb_004032_080 Hb_004032_080 Hb_000160_200--Hb_004032_080 Hb_000009_620 Hb_000009_620 Hb_000828_040--Hb_000009_620 Hb_001507_100 Hb_001507_100 Hb_000828_040--Hb_001507_100 Hb_000640_300 Hb_000640_300 Hb_000828_040--Hb_000640_300 Hb_003160_020 Hb_003160_020 Hb_000828_040--Hb_003160_020 Hb_028872_060 Hb_028872_060 Hb_000828_040--Hb_028872_060 Hb_001150_040 Hb_001150_040 Hb_000828_040--Hb_001150_040 Hb_000953_060 Hb_000953_060 Hb_000861_030--Hb_000953_060 Hb_005410_040 Hb_005410_040 Hb_000861_030--Hb_005410_040 Hb_000891_040 Hb_000891_040 Hb_000861_030--Hb_000891_040 Hb_056506_050 Hb_056506_050 Hb_000861_030--Hb_056506_050 Hb_000861_030--Hb_004883_060 Hb_004342_030 Hb_004342_030 Hb_000861_030--Hb_004342_030 Hb_004883_060--Hb_005410_040 Hb_003073_210 Hb_003073_210 Hb_004883_060--Hb_003073_210 Hb_171789_010 Hb_171789_010 Hb_004883_060--Hb_171789_010 Hb_139859_010 Hb_139859_010 Hb_004883_060--Hb_139859_010 Hb_000139_240 Hb_000139_240 Hb_004883_060--Hb_000139_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
31.2235 6.60028 0.209701 1.71638 1.16149 34.5004
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.90424 8.79815 1.76123 20.5811 0.488153

CAGE analysis