Hb_000061_120

Information

Type -
Description -
Location Contig61: 116920-119279
Sequence    

Annotation

kegg
ID rcu:RCOM_1471410
description heat shock protein binding protein, putative
nr
ID XP_012080294.1
description PREDICTED: dnaJ homolog subfamily C member 16 [Jatropha curcas]
swissprot
ID Q5WHG0
description Chaperone protein DnaJ OS=Bacillus clausii (strain KSM-K16) GN=dnaJ PE=3 SV=1
trembl
ID A0A067KGA2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11651 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50908: 118868-119224
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000061_120 0.0 - - PREDICTED: dnaJ homolog subfamily C member 16 [Jatropha curcas]
2 Hb_112198_010 0.1123167315 - - PREDICTED: F-box protein SKIP22 [Jatropha curcas]
3 Hb_001146_010 0.1165696289 - - cystathionine gamma-synthase, putative [Ricinus communis]
4 Hb_004435_030 0.1231680954 - - PREDICTED: F-box protein SKIP22 [Jatropha curcas]
5 Hb_007747_080 0.1277498719 - - conserved hypothetical protein [Ricinus communis]
6 Hb_010128_100 0.1296880496 - - PREDICTED: probable L-cysteine desulfhydrase, chloroplastic [Jatropha curcas]
7 Hb_001268_410 0.1323334504 transcription factor TF Family: TCP PREDICTED: transcription factor TCP20 [Jatropha curcas]
8 Hb_005396_150 0.1332116254 - - protein binding protein, putative [Ricinus communis]
9 Hb_000917_230 0.1339486904 - - PREDICTED: coiled-coil domain-containing protein 130-like [Jatropha curcas]
10 Hb_000983_050 0.1351808221 - - ubiquitin-protein ligase, putative [Ricinus communis]
11 Hb_034688_020 0.1358147768 - - PREDICTED: uncharacterized protein LOC105642050 [Jatropha curcas]
12 Hb_000625_090 0.1389018878 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000521_240 0.1399757732 - - PREDICTED: uncharacterized protein LOC105650339 isoform X2 [Jatropha curcas]
14 Hb_000215_320 0.1401052841 - - phosphofructokinase [Hevea brasiliensis]
15 Hb_000029_140 0.1404885351 - - PREDICTED: putative GDP-L-fucose synthase 2 [Populus euphratica]
16 Hb_000749_050 0.1417632944 - - mitochondrial thioredoxin [Hevea brasiliensis]
17 Hb_028487_140 0.1420286581 - - PREDICTED: myosin-binding protein 2 [Jatropha curcas]
18 Hb_010519_050 0.1422492379 - - galactokinase, putative [Ricinus communis]
19 Hb_000152_330 0.1434245026 - - PREDICTED: AT-hook motif nuclear-localized protein 6-like [Jatropha curcas]
20 Hb_001969_080 0.1436146845 - - PREDICTED: uncharacterized protein LOC105634921 [Jatropha curcas]

Gene co-expression network

sample Hb_000061_120 Hb_000061_120 Hb_112198_010 Hb_112198_010 Hb_000061_120--Hb_112198_010 Hb_001146_010 Hb_001146_010 Hb_000061_120--Hb_001146_010 Hb_004435_030 Hb_004435_030 Hb_000061_120--Hb_004435_030 Hb_007747_080 Hb_007747_080 Hb_000061_120--Hb_007747_080 Hb_010128_100 Hb_010128_100 Hb_000061_120--Hb_010128_100 Hb_001268_410 Hb_001268_410 Hb_000061_120--Hb_001268_410 Hb_112198_010--Hb_004435_030 Hb_003906_200 Hb_003906_200 Hb_112198_010--Hb_003906_200 Hb_000917_230 Hb_000917_230 Hb_112198_010--Hb_000917_230 Hb_004030_080 Hb_004030_080 Hb_112198_010--Hb_004030_080 Hb_000868_090 Hb_000868_090 Hb_112198_010--Hb_000868_090 Hb_005582_040 Hb_005582_040 Hb_112198_010--Hb_005582_040 Hb_034688_020 Hb_034688_020 Hb_001146_010--Hb_034688_020 Hb_028487_140 Hb_028487_140 Hb_001146_010--Hb_028487_140 Hb_000152_330 Hb_000152_330 Hb_001146_010--Hb_000152_330 Hb_000538_230 Hb_000538_230 Hb_001146_010--Hb_000538_230 Hb_000749_050 Hb_000749_050 Hb_001146_010--Hb_000749_050 Hb_001716_040 Hb_001716_040 Hb_004435_030--Hb_001716_040 Hb_008948_020 Hb_008948_020 Hb_004435_030--Hb_008948_020 Hb_000640_040 Hb_000640_040 Hb_004435_030--Hb_000640_040 Hb_004435_030--Hb_005582_040 Hb_001635_120 Hb_001635_120 Hb_004435_030--Hb_001635_120 Hb_005396_150 Hb_005396_150 Hb_007747_080--Hb_005396_150 Hb_003544_030 Hb_003544_030 Hb_007747_080--Hb_003544_030 Hb_001157_200 Hb_001157_200 Hb_007747_080--Hb_001157_200 Hb_000984_170 Hb_000984_170 Hb_007747_080--Hb_000984_170 Hb_007747_080--Hb_112198_010 Hb_119530_010 Hb_119530_010 Hb_007747_080--Hb_119530_010 Hb_000483_300 Hb_000483_300 Hb_010128_100--Hb_000483_300 Hb_001269_190 Hb_001269_190 Hb_010128_100--Hb_001269_190 Hb_023371_020 Hb_023371_020 Hb_010128_100--Hb_023371_020 Hb_001951_150 Hb_001951_150 Hb_010128_100--Hb_001951_150 Hb_001141_420 Hb_001141_420 Hb_010128_100--Hb_001141_420 Hb_001512_010 Hb_001512_010 Hb_010128_100--Hb_001512_010 Hb_029584_050 Hb_029584_050 Hb_001268_410--Hb_029584_050 Hb_002400_410 Hb_002400_410 Hb_001268_410--Hb_002400_410 Hb_001268_410--Hb_119530_010 Hb_000327_180 Hb_000327_180 Hb_001268_410--Hb_000327_180 Hb_001268_410--Hb_005396_150 Hb_001268_410--Hb_000917_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.31184 3.13489 1.06747 2.8007 0.399236 1.04823
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.15529 1.65367 1.47536 2.09614 2.13846

CAGE analysis