Hb_000061_360

Information

Type -
Description -
Location Contig61: 316467-320339
Sequence    

Annotation

kegg
ID rcu:RCOM_1470870
description Brassinosteroid LRR receptor kinase precursor, putative (EC:2.7.12.2 3.1.3.16)
nr
ID XP_002514709.1
description Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
swissprot
ID C0LGJ1
description Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=2 SV=1
trembl
ID B9RLU0
description Brassinosteroid LRR receptor kinase, putative OS=Ricinus communis GN=RCOM_1470870 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable lrr receptor-like serine threonine-protein kinase at1g74360

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000061_360 0.0 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
2 Hb_000567_300 0.0548326006 - - PREDICTED: protein YLS9-like [Jatropha curcas]
3 Hb_004881_080 0.0735582916 - - PREDICTED: glycerol-3-phosphate acyltransferase 1 [Populus euphratica]
4 Hb_005550_040 0.0867687204 - - PREDICTED: epoxide hydrolase 4-like [Jatropha curcas]
5 Hb_003189_020 0.1006800084 - - PREDICTED: probable glutathione S-transferase [Jatropha curcas]
6 Hb_001949_010 0.1243350945 - - PREDICTED: VQ motif-containing protein 11 [Jatropha curcas]
7 Hb_002218_040 0.130364663 - - conserved hypothetical protein [Ricinus communis]
8 Hb_178703_010 0.1358744968 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
9 Hb_032631_080 0.1388687126 - - PREDICTED: L-Ala-D/L-amino acid epimerase-like isoform X2 [Jatropha curcas]
10 Hb_046770_010 0.139453516 - - conserved hypothetical protein [Ricinus communis]
11 Hb_006573_250 0.1409691524 - - PREDICTED: ABC transporter G family member 8 [Jatropha curcas]
12 Hb_074892_010 0.144984413 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
13 Hb_022815_020 0.1481304742 - - PREDICTED: uncharacterized protein LOC105650107 [Jatropha curcas]
14 Hb_109673_010 0.1511417548 - - glutathione s-transferase, putative [Ricinus communis]
15 Hb_001597_110 0.1551787523 - - -
16 Hb_001172_030 0.155213121 - - PREDICTED: protein NRT1/ PTR FAMILY 7.2-like isoform X1 [Jatropha curcas]
17 Hb_000659_010 0.1557221278 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
18 Hb_000484_040 0.1559159255 - - PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Jatropha curcas]
19 Hb_094439_030 0.1628309287 - - PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g38780 [Eucalyptus grandis]
20 Hb_026284_010 0.1634682488 - - -

Gene co-expression network

sample Hb_000061_360 Hb_000061_360 Hb_000567_300 Hb_000567_300 Hb_000061_360--Hb_000567_300 Hb_004881_080 Hb_004881_080 Hb_000061_360--Hb_004881_080 Hb_005550_040 Hb_005550_040 Hb_000061_360--Hb_005550_040 Hb_003189_020 Hb_003189_020 Hb_000061_360--Hb_003189_020 Hb_001949_010 Hb_001949_010 Hb_000061_360--Hb_001949_010 Hb_002218_040 Hb_002218_040 Hb_000061_360--Hb_002218_040 Hb_000567_300--Hb_004881_080 Hb_022815_020 Hb_022815_020 Hb_000567_300--Hb_022815_020 Hb_000659_010 Hb_000659_010 Hb_000567_300--Hb_000659_010 Hb_001172_030 Hb_001172_030 Hb_000567_300--Hb_001172_030 Hb_000567_300--Hb_005550_040 Hb_004881_080--Hb_002218_040 Hb_004881_080--Hb_003189_020 Hb_032631_080 Hb_032631_080 Hb_004881_080--Hb_032631_080 Hb_004881_080--Hb_005550_040 Hb_005550_040--Hb_003189_020 Hb_178703_010 Hb_178703_010 Hb_005550_040--Hb_178703_010 Hb_005550_040--Hb_001949_010 Hb_046770_010 Hb_046770_010 Hb_005550_040--Hb_046770_010 Hb_105134_010 Hb_105134_010 Hb_005550_040--Hb_105134_010 Hb_003189_020--Hb_105134_010 Hb_003189_020--Hb_178703_010 Hb_003189_020--Hb_046770_010 Hb_011576_010 Hb_011576_010 Hb_001949_010--Hb_011576_010 Hb_001949_010--Hb_178703_010 Hb_032223_020 Hb_032223_020 Hb_001949_010--Hb_032223_020 Hb_000751_050 Hb_000751_050 Hb_001949_010--Hb_000751_050 Hb_000075_030 Hb_000075_030 Hb_002218_040--Hb_000075_030 Hb_002248_020 Hb_002248_020 Hb_002218_040--Hb_002248_020 Hb_001005_210 Hb_001005_210 Hb_002218_040--Hb_001005_210 Hb_002218_040--Hb_032631_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0115164 0.00712684 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0843616 0.019816

CAGE analysis