Hb_000061_430

Information

Type -
Description -
Location Contig61: 371793-373745
Sequence    

Annotation

kegg
ID rcu:RCOM_1470710
description hypothetical protein
nr
ID XP_002514703.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RLT4
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1470710 PE=4 SV=1
Gene Ontology
ID GO:0005516
description muscle m-line assembly protein unc-89 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000061_430 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_011033_010 0.1276085727 - - ATP-binding cassette transporter, putative [Ricinus communis]
3 Hb_136441_010 0.1357096277 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
4 Hb_005890_020 0.1359783287 - - putative plant disease resistance family protein [Populus trichocarpa]
5 Hb_001347_030 0.1462859299 - - ubiquitin-protein ligase, putative [Ricinus communis]
6 Hb_019973_010 0.1468966983 - - PREDICTED: probable methyltransferase PMT18 isoform X2 [Jatropha curcas]
7 Hb_010288_030 0.1473438056 - - PREDICTED: uncharacterized protein LOC105642607 [Jatropha curcas]
8 Hb_029432_010 0.1486521739 - - UDP-glucosyltransferase, putative [Ricinus communis]
9 Hb_001439_080 0.1509794582 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 [Jatropha curcas]
10 Hb_000139_040 0.1531398256 - - spermine synthase, putative [Ricinus communis]
11 Hb_000032_360 0.1567151767 - - PREDICTED: NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Jatropha curcas]
12 Hb_002244_020 0.1580215503 - - PREDICTED: U-box domain-containing protein 26-like [Jatropha curcas]
13 Hb_003581_230 0.1605050668 - - PREDICTED: LOW QUALITY PROTEIN: SNF1-related protein kinase regulatory subunit gamma-1-like [Jatropha curcas]
14 Hb_000352_010 0.1612457188 - - PREDICTED: nudix hydrolase 13, mitochondrial [Jatropha curcas]
15 Hb_000056_030 0.1633824847 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390 isoform X1 [Jatropha curcas]
16 Hb_010683_030 0.1658124421 - - conserved hypothetical protein [Ricinus communis]
17 Hb_004093_030 0.1671010704 - - hypothetical protein RCOM_1406750 [Ricinus communis]
18 Hb_004115_010 0.1676730615 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG11 [Jatropha curcas]
19 Hb_004447_050 0.1690032916 - - PREDICTED: high-light-induced protein, chloroplastic [Jatropha curcas]
20 Hb_010863_030 0.1716383126 - - PREDICTED: uncharacterized protein LOC105642466 [Jatropha curcas]

Gene co-expression network

sample Hb_000061_430 Hb_000061_430 Hb_011033_010 Hb_011033_010 Hb_000061_430--Hb_011033_010 Hb_136441_010 Hb_136441_010 Hb_000061_430--Hb_136441_010 Hb_005890_020 Hb_005890_020 Hb_000061_430--Hb_005890_020 Hb_001347_030 Hb_001347_030 Hb_000061_430--Hb_001347_030 Hb_019973_010 Hb_019973_010 Hb_000061_430--Hb_019973_010 Hb_010288_030 Hb_010288_030 Hb_000061_430--Hb_010288_030 Hb_011033_010--Hb_010288_030 Hb_071674_010 Hb_071674_010 Hb_011033_010--Hb_071674_010 Hb_011033_010--Hb_005890_020 Hb_012055_080 Hb_012055_080 Hb_011033_010--Hb_012055_080 Hb_018133_070 Hb_018133_070 Hb_011033_010--Hb_018133_070 Hb_002121_030 Hb_002121_030 Hb_136441_010--Hb_002121_030 Hb_000809_220 Hb_000809_220 Hb_136441_010--Hb_000809_220 Hb_062773_010 Hb_062773_010 Hb_136441_010--Hb_062773_010 Hb_000139_040 Hb_000139_040 Hb_136441_010--Hb_000139_040 Hb_129956_010 Hb_129956_010 Hb_136441_010--Hb_129956_010 Hb_005496_040 Hb_005496_040 Hb_005890_020--Hb_005496_040 Hb_001080_190 Hb_001080_190 Hb_005890_020--Hb_001080_190 Hb_002301_400 Hb_002301_400 Hb_005890_020--Hb_002301_400 Hb_001439_080 Hb_001439_080 Hb_005890_020--Hb_001439_080 Hb_017383_010 Hb_017383_010 Hb_005890_020--Hb_017383_010 Hb_000103_220 Hb_000103_220 Hb_005890_020--Hb_000103_220 Hb_000042_390 Hb_000042_390 Hb_001347_030--Hb_000042_390 Hb_001536_020 Hb_001536_020 Hb_001347_030--Hb_001536_020 Hb_010863_030 Hb_010863_030 Hb_001347_030--Hb_010863_030 Hb_029432_010 Hb_029432_010 Hb_001347_030--Hb_029432_010 Hb_007574_020 Hb_007574_020 Hb_001347_030--Hb_007574_020 Hb_000120_340 Hb_000120_340 Hb_019973_010--Hb_000120_340 Hb_004115_010 Hb_004115_010 Hb_019973_010--Hb_004115_010 Hb_000086_470 Hb_000086_470 Hb_019973_010--Hb_000086_470 Hb_000349_250 Hb_000349_250 Hb_019973_010--Hb_000349_250 Hb_004202_030 Hb_004202_030 Hb_019973_010--Hb_004202_030 Hb_003207_120 Hb_003207_120 Hb_019973_010--Hb_003207_120 Hb_010288_030--Hb_071674_010 Hb_003020_190 Hb_003020_190 Hb_010288_030--Hb_003020_190 Hb_000352_010 Hb_000352_010 Hb_010288_030--Hb_000352_010 Hb_001755_040 Hb_001755_040 Hb_010288_030--Hb_001755_040 Hb_010288_030--Hb_007574_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0941993 0.111183 0.954773 0.562601 0.0292967 0.00892272
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00725539 0.423552

CAGE analysis