Hb_000062_010

Information

Type -
Description -
Location Contig62: 6292-8701
Sequence    

Annotation

kegg
ID rcu:RCOM_1082570
description Alpha-L-fucosidase 2 precursor, putative
nr
ID XP_002515022.1
description Alpha-L-fucosidase 2 precursor, putative [Ricinus communis]
swissprot
ID Q9STM6
description GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana GN=At3g48460 PE=2 SV=1
trembl
ID B9RMQ3
description Alpha-L-fucosidase 2, putative OS=Ricinus communis GN=RCOM_1082570 PE=4 SV=1
Gene Ontology
ID GO:0016788
description gdsl esterase lipase at3g48460-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000062_010 0.0 - - Alpha-L-fucosidase 2 precursor, putative [Ricinus communis]
2 Hb_003226_080 0.2297028928 - - PREDICTED: RING-H2 finger protein ATL5-like [Jatropha curcas]
3 Hb_001059_090 0.2594259102 - - PREDICTED: F-box protein At1g61340 [Jatropha curcas]
4 Hb_006545_020 0.268895 - - multicopper oxidase, putative [Ricinus communis]
5 Hb_008380_010 0.2693991879 - - PREDICTED: PRA1 family protein B4-like [Camelina sativa]
6 Hb_007951_120 0.2734443983 - - PREDICTED: uncharacterized protein At1g15400 [Populus euphratica]
7 Hb_000109_130 0.2742515621 - - PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [Jatropha curcas]
8 Hb_000659_020 0.2750189203 - - PREDICTED: putative L-type lectin-domain containing receptor kinase II.2 [Jatropha curcas]
9 Hb_002374_330 0.277224475 - - -
10 Hb_004586_130 0.286098274 - - conserved hypothetical protein [Ricinus communis]
11 Hb_005488_120 0.2927843107 - - PREDICTED: DNA polymerase delta subunit 4 [Jatropha curcas]
12 Hb_007403_080 0.2929390123 - - conserved hypothetical protein [Ricinus communis]
13 Hb_008221_130 0.2946426826 - - hypothetical protein VITISV_016971 [Vitis vinifera]
14 Hb_053519_010 0.2961187653 - - PREDICTED: probable zinc transporter protein DDB_G0282067 [Jatropha curcas]
15 Hb_102437_010 0.2982422459 - - PREDICTED: B-cell receptor-associated protein 31 [Beta vulgaris subsp. vulgaris]
16 Hb_011360_090 0.2983176856 - - PREDICTED: uncharacterized protein LOC105644141 [Jatropha curcas]
17 Hb_000029_410 0.2985163994 - - AT14A, putative [Ricinus communis]
18 Hb_000451_040 0.3009818174 - - conserved hypothetical protein [Ricinus communis]
19 Hb_163430_010 0.3040704177 - - Polyneuridine-aldehyde esterase precursor, putative [Ricinus communis]
20 Hb_003216_050 0.3048579864 - - PREDICTED: OBERON-like protein [Jatropha curcas]

Gene co-expression network

sample Hb_000062_010 Hb_000062_010 Hb_003226_080 Hb_003226_080 Hb_000062_010--Hb_003226_080 Hb_001059_090 Hb_001059_090 Hb_000062_010--Hb_001059_090 Hb_006545_020 Hb_006545_020 Hb_000062_010--Hb_006545_020 Hb_008380_010 Hb_008380_010 Hb_000062_010--Hb_008380_010 Hb_007951_120 Hb_007951_120 Hb_000062_010--Hb_007951_120 Hb_000109_130 Hb_000109_130 Hb_000062_010--Hb_000109_130 Hb_011360_090 Hb_011360_090 Hb_003226_080--Hb_011360_090 Hb_008246_090 Hb_008246_090 Hb_003226_080--Hb_008246_090 Hb_004586_130 Hb_004586_130 Hb_003226_080--Hb_004586_130 Hb_006414_020 Hb_006414_020 Hb_003226_080--Hb_006414_020 Hb_001989_060 Hb_001989_060 Hb_003226_080--Hb_001989_060 Hb_009040_010 Hb_009040_010 Hb_003226_080--Hb_009040_010 Hb_001059_090--Hb_004586_130 Hb_000185_230 Hb_000185_230 Hb_001059_090--Hb_000185_230 Hb_000221_230 Hb_000221_230 Hb_001059_090--Hb_000221_230 Hb_005883_070 Hb_005883_070 Hb_001059_090--Hb_005883_070 Hb_002151_130 Hb_002151_130 Hb_001059_090--Hb_002151_130 Hb_001059_090--Hb_000109_130 Hb_006545_020--Hb_000109_130 Hb_002897_100 Hb_002897_100 Hb_006545_020--Hb_002897_100 Hb_006545_020--Hb_000185_230 Hb_004193_010 Hb_004193_010 Hb_006545_020--Hb_004193_010 Hb_006545_020--Hb_001059_090 Hb_000272_110 Hb_000272_110 Hb_006545_020--Hb_000272_110 Hb_098160_010 Hb_098160_010 Hb_008380_010--Hb_098160_010 Hb_008380_010--Hb_006414_020 Hb_001898_010 Hb_001898_010 Hb_008380_010--Hb_001898_010 Hb_000103_400 Hb_000103_400 Hb_008380_010--Hb_000103_400 Hb_033149_020 Hb_033149_020 Hb_008380_010--Hb_033149_020 Hb_181824_010 Hb_181824_010 Hb_008380_010--Hb_181824_010 Hb_102100_010 Hb_102100_010 Hb_007951_120--Hb_102100_010 Hb_007951_120--Hb_181824_010 Hb_007951_120--Hb_033149_020 Hb_056012_010 Hb_056012_010 Hb_007951_120--Hb_056012_010 Hb_007951_120--Hb_006414_020 Hb_003216_050 Hb_003216_050 Hb_007951_120--Hb_003216_050 Hb_000076_100 Hb_000076_100 Hb_000109_130--Hb_000076_100 Hb_005488_120 Hb_005488_120 Hb_000109_130--Hb_005488_120 Hb_001246_160 Hb_001246_160 Hb_000109_130--Hb_001246_160 Hb_000109_130--Hb_004586_130 Hb_010368_080 Hb_010368_080 Hb_000109_130--Hb_010368_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.179027 0.108993 0.070287 0.0445613 0.02211
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0401977 0.0169777 0

CAGE analysis