Hb_000062_100

Information

Type -
Description -
Location Contig62: 76558-78399
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000062_100 0.0 - - -
2 Hb_012368_010 0.1768361433 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
3 Hb_005285_020 0.2124091139 - - -
4 Hb_004032_320 0.213477942 - - PREDICTED: uncharacterized protein LOC105635153 [Jatropha curcas]
5 Hb_002026_170 0.2241844446 - - kinesin heavy chain, putative [Ricinus communis]
6 Hb_000854_040 0.2252455008 - - PREDICTED: GPI mannosyltransferase 3 [Jatropha curcas]
7 Hb_000078_080 0.2253045328 transcription factor TF Family: AUX/IAA hypothetical protein JCGZ_17040 [Jatropha curcas]
8 Hb_000212_190 0.2289332249 - - PREDICTED: phospholipase A(1) LCAT3 isoform X1 [Jatropha curcas]
9 Hb_004097_130 0.2365951131 - - Inositol-tetrakisphosphate 1-kinase, putative [Ricinus communis]
10 Hb_000566_050 0.2389224428 - - PREDICTED: uncharacterized protein LOC105644845 [Jatropha curcas]
11 Hb_171215_010 0.2397042116 - - vesicle-associated membrane protein, putative [Ricinus communis]
12 Hb_012799_050 0.2423771937 - - PREDICTED: remorin [Jatropha curcas]
13 Hb_000540_050 0.2426826494 - - PREDICTED: 125 kDa kinesin-related protein-like [Jatropha curcas]
14 Hb_008226_030 0.2445267759 - - RING-H2 finger protein ATL3C, putative [Ricinus communis]
15 Hb_009486_040 0.245199873 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
16 Hb_000103_530 0.2467395175 - - PREDICTED: uncharacterized protein LOC105632061 [Jatropha curcas]
17 Hb_121881_010 0.2472879646 - - hypothetical protein POPTR_0015s15770g [Populus trichocarpa]
18 Hb_001472_060 0.2485887822 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform X1 [Jatropha curcas]
19 Hb_000120_640 0.2489722356 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
20 Hb_000708_040 0.2503187572 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000062_100 Hb_000062_100 Hb_012368_010 Hb_012368_010 Hb_000062_100--Hb_012368_010 Hb_005285_020 Hb_005285_020 Hb_000062_100--Hb_005285_020 Hb_004032_320 Hb_004032_320 Hb_000062_100--Hb_004032_320 Hb_002026_170 Hb_002026_170 Hb_000062_100--Hb_002026_170 Hb_000854_040 Hb_000854_040 Hb_000062_100--Hb_000854_040 Hb_000078_080 Hb_000078_080 Hb_000062_100--Hb_000078_080 Hb_000540_050 Hb_000540_050 Hb_012368_010--Hb_000540_050 Hb_012368_010--Hb_002026_170 Hb_002234_060 Hb_002234_060 Hb_012368_010--Hb_002234_060 Hb_000032_440 Hb_000032_440 Hb_012368_010--Hb_000032_440 Hb_000708_040 Hb_000708_040 Hb_012368_010--Hb_000708_040 Hb_000215_080 Hb_000215_080 Hb_005285_020--Hb_000215_080 Hb_008695_140 Hb_008695_140 Hb_005285_020--Hb_008695_140 Hb_031862_130 Hb_031862_130 Hb_005285_020--Hb_031862_130 Hb_000197_250 Hb_000197_250 Hb_005285_020--Hb_000197_250 Hb_005285_020--Hb_000854_040 Hb_000948_150 Hb_000948_150 Hb_005285_020--Hb_000948_150 Hb_002684_020 Hb_002684_020 Hb_004032_320--Hb_002684_020 Hb_001102_070 Hb_001102_070 Hb_004032_320--Hb_001102_070 Hb_000453_030 Hb_000453_030 Hb_004032_320--Hb_000453_030 Hb_001799_160 Hb_001799_160 Hb_004032_320--Hb_001799_160 Hb_001633_200 Hb_001633_200 Hb_004032_320--Hb_001633_200 Hb_000566_050 Hb_000566_050 Hb_004032_320--Hb_000566_050 Hb_002026_170--Hb_000540_050 Hb_000019_150 Hb_000019_150 Hb_002026_170--Hb_000019_150 Hb_001472_060 Hb_001472_060 Hb_002026_170--Hb_001472_060 Hb_000808_050 Hb_000808_050 Hb_002026_170--Hb_000808_050 Hb_001511_050 Hb_001511_050 Hb_002026_170--Hb_001511_050 Hb_002498_140 Hb_002498_140 Hb_002026_170--Hb_002498_140 Hb_001252_090 Hb_001252_090 Hb_000854_040--Hb_001252_090 Hb_003777_200 Hb_003777_200 Hb_000854_040--Hb_003777_200 Hb_000317_040 Hb_000317_040 Hb_000854_040--Hb_000317_040 Hb_000854_040--Hb_001633_200 Hb_001454_230 Hb_001454_230 Hb_000854_040--Hb_001454_230 Hb_000748_030 Hb_000748_030 Hb_000854_040--Hb_000748_030 Hb_009486_040 Hb_009486_040 Hb_000078_080--Hb_009486_040 Hb_000230_290 Hb_000230_290 Hb_000078_080--Hb_000230_290 Hb_000705_250 Hb_000705_250 Hb_000078_080--Hb_000705_250 Hb_003025_140 Hb_003025_140 Hb_000078_080--Hb_003025_140 Hb_001393_010 Hb_001393_010 Hb_000078_080--Hb_001393_010 Hb_011224_100 Hb_011224_100 Hb_000078_080--Hb_011224_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.223618 0.153683 0.57606 0.339118 0.112728 0.151757
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.130776 0 0.698468 0.0852991 0.385488

CAGE analysis