Hb_000062_410

Information

Type -
Description -
Location Contig62: 315154-316834
Sequence    

Annotation

kegg
ID rcu:RCOM_1081740
description hypothetical protein
nr
ID XP_012085622.1
description PREDICTED: uncharacterized protein LOC105644766 [Jatropha curcas]
swissprot
ID O32107
description Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) GN=yuiD PE=4 SV=1
trembl
ID A0A067K4P8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17917 PE=4 SV=1
Gene Ontology
ID GO:0016020
description membrane protein yuid

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000062_410 0.0 - - PREDICTED: uncharacterized protein LOC105644766 [Jatropha curcas]
2 Hb_000317_530 0.1438386392 - - hypothetical protein, partial [Pseudomonas fluorescens]
3 Hb_000031_040 0.2357879413 - - centromere protein O [Medicago truncatula]
4 Hb_000011_340 0.249717566 - - PREDICTED: protein LURP-one-related 11-like [Jatropha curcas]
5 Hb_001520_020 0.2501265575 - - PREDICTED: metal tolerance protein C2 [Jatropha curcas]
6 Hb_000487_280 0.2633324234 - - -
7 Hb_012163_030 0.2674066453 - - PREDICTED: uncharacterized protein LOC105647861 [Jatropha curcas]
8 Hb_010422_080 0.2691339196 - - -
9 Hb_000613_150 0.2935826098 - - PREDICTED: uncharacterized protein LOC105641537 isoform X1 [Jatropha curcas]
10 Hb_096224_020 0.2966193712 - - hypothetical protein JCGZ_06980 [Jatropha curcas]
11 Hb_004907_020 0.3120798396 - - PREDICTED: ABC transporter G family member 6-like [Jatropha curcas]
12 Hb_116349_010 0.3182021116 - - PREDICTED: uncharacterized protein LOC105763153 [Gossypium raimondii]
13 Hb_001534_020 0.3242873655 - - conserved hypothetical protein [Ricinus communis]
14 Hb_141408_010 0.3270455494 - - PREDICTED: uncharacterized protein LOC105631382 [Jatropha curcas]
15 Hb_002282_040 0.3289222442 - - hypothetical protein VITISV_030841 [Vitis vinifera]
16 Hb_001348_110 0.3350969646 - - PREDICTED: esterase-like [Jatropha curcas]
17 Hb_160366_010 0.3352033822 - - PREDICTED: uncharacterized protein LOC104894399 [Beta vulgaris subsp. vulgaris]
18 Hb_000123_200 0.3366254961 - - PREDICTED: WAT1-related protein At2g39510 [Jatropha curcas]
19 Hb_109268_010 0.3368629477 - - PREDICTED: uncharacterized protein LOC105650977 [Jatropha curcas]
20 Hb_026740_010 0.3396207192 - - PREDICTED: serine/threonine-protein phosphatase 7 [Jatropha curcas]

Gene co-expression network

sample Hb_000062_410 Hb_000062_410 Hb_000317_530 Hb_000317_530 Hb_000062_410--Hb_000317_530 Hb_000031_040 Hb_000031_040 Hb_000062_410--Hb_000031_040 Hb_000011_340 Hb_000011_340 Hb_000062_410--Hb_000011_340 Hb_001520_020 Hb_001520_020 Hb_000062_410--Hb_001520_020 Hb_000487_280 Hb_000487_280 Hb_000062_410--Hb_000487_280 Hb_012163_030 Hb_012163_030 Hb_000062_410--Hb_012163_030 Hb_000613_150 Hb_000613_150 Hb_000317_530--Hb_000613_150 Hb_010422_080 Hb_010422_080 Hb_000317_530--Hb_010422_080 Hb_000317_530--Hb_012163_030 Hb_000317_530--Hb_000031_040 Hb_000317_530--Hb_000487_280 Hb_000031_040--Hb_010422_080 Hb_000031_040--Hb_000487_280 Hb_001959_300 Hb_001959_300 Hb_000031_040--Hb_001959_300 Hb_000395_060 Hb_000395_060 Hb_000031_040--Hb_000395_060 Hb_000011_340--Hb_001520_020 Hb_001348_110 Hb_001348_110 Hb_000011_340--Hb_001348_110 Hb_000011_340--Hb_000487_280 Hb_008954_010 Hb_008954_010 Hb_000011_340--Hb_008954_010 Hb_000804_030 Hb_000804_030 Hb_000011_340--Hb_000804_030 Hb_116349_010 Hb_116349_010 Hb_000011_340--Hb_116349_010 Hb_001520_020--Hb_001348_110 Hb_001520_020--Hb_008954_010 Hb_001520_020--Hb_000487_280 Hb_001520_020--Hb_000804_030 Hb_009954_050 Hb_009954_050 Hb_001520_020--Hb_009954_050 Hb_000487_280--Hb_116349_010 Hb_000487_280--Hb_010422_080 Hb_000487_280--Hb_008954_010 Hb_000487_280--Hb_001348_110 Hb_012163_030--Hb_000613_150 Hb_012163_030--Hb_008954_010 Hb_006588_010 Hb_006588_010 Hb_012163_030--Hb_006588_010 Hb_012163_030--Hb_001348_110 Hb_012163_030--Hb_000804_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0518739 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.314876 0.123666 0 0.10387 0

CAGE analysis