Hb_000062_500

Information

Type -
Description -
Location Contig62: 362688-364522
Sequence    

Annotation

kegg
ID zma:103635407
description urease-like
nr
ID XP_008656085.1
description PREDICTED: urease-like [Zea mays]
swissprot
ID E0ZS48
description Urease OS=Oryza sativa subsp. indica PE=1 SV=1
trembl
ID I1GLH5
description Urease OS=Brachypodium distachyon GN=BRADI1G03550 PE=3 SV=1
Gene Ontology
ID GO:0016787
description urease isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000062_500 0.0 - - PREDICTED: urease-like [Zea mays]
2 Hb_032018_010 0.0471590909 - - PREDICTED: uncharacterized protein LOC105778873 [Gossypium raimondii]
3 Hb_005203_050 0.2044834712 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
4 Hb_003772_020 0.2236238857 - - PREDICTED: uncharacterized protein LOC105037131, partial [Elaeis guineensis]
5 Hb_007978_020 0.2271783905 transcription factor TF Family: bZIP PREDICTED: transcription factor TGA1-like [Jatropha curcas]
6 Hb_000014_130 0.232347044 - - PREDICTED: uncharacterized protein LOC104219776 [Nicotiana sylvestris]
7 Hb_167316_010 0.235890007 - - PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 1 [Nicotiana sylvestris]
8 Hb_002837_090 0.2423991642 - - PREDICTED: probable receptor-like protein kinase At5g18500 [Jatropha curcas]
9 Hb_004650_090 0.2513211007 - - -
10 Hb_010997_100 0.252739241 transcription factor TF Family: mTERF -
11 Hb_000317_090 0.2587753581 - - hypothetical protein RCOM_1176360 [Ricinus communis]
12 Hb_003816_020 0.2636359849 - - hypothetical protein POPTR_0017s05940g [Populus trichocarpa]
13 Hb_041237_010 0.2730539179 - - conserved hypothetical protein [Ricinus communis]
14 Hb_137515_010 0.2824242535 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X1 [Populus euphratica]
15 Hb_011794_020 0.2898614673 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
16 Hb_061365_010 0.2902464813 - - PREDICTED: uncharacterized protein LOC104227769, partial [Nicotiana sylvestris]
17 Hb_003609_010 0.3025317452 - - -
18 Hb_097433_020 0.3052629569 - - ATP-binding cassette transporter, putative [Ricinus communis]
19 Hb_050495_010 0.3091345741 - - heat-shock protein, putative [Ricinus communis]
20 Hb_005715_020 0.3127742496 - - PREDICTED: ras-related protein RABC2a-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000062_500 Hb_000062_500 Hb_032018_010 Hb_032018_010 Hb_000062_500--Hb_032018_010 Hb_005203_050 Hb_005203_050 Hb_000062_500--Hb_005203_050 Hb_003772_020 Hb_003772_020 Hb_000062_500--Hb_003772_020 Hb_007978_020 Hb_007978_020 Hb_000062_500--Hb_007978_020 Hb_000014_130 Hb_000014_130 Hb_000062_500--Hb_000014_130 Hb_167316_010 Hb_167316_010 Hb_000062_500--Hb_167316_010 Hb_002837_090 Hb_002837_090 Hb_032018_010--Hb_002837_090 Hb_032018_010--Hb_005203_050 Hb_032018_010--Hb_000014_130 Hb_032018_010--Hb_003772_020 Hb_000317_090 Hb_000317_090 Hb_032018_010--Hb_000317_090 Hb_033926_010 Hb_033926_010 Hb_005203_050--Hb_033926_010 Hb_009189_030 Hb_009189_030 Hb_005203_050--Hb_009189_030 Hb_009922_010 Hb_009922_010 Hb_005203_050--Hb_009922_010 Hb_053643_010 Hb_053643_010 Hb_005203_050--Hb_053643_010 Hb_003772_020--Hb_000014_130 Hb_003772_020--Hb_007978_020 Hb_041237_010 Hb_041237_010 Hb_003772_020--Hb_041237_010 Hb_010447_020 Hb_010447_020 Hb_003772_020--Hb_010447_020 Hb_181975_010 Hb_181975_010 Hb_007978_020--Hb_181975_010 Hb_007978_020--Hb_041237_010 Hb_000574_150 Hb_000574_150 Hb_007978_020--Hb_000574_150 Hb_007978_020--Hb_000014_130 Hb_000617_040 Hb_000617_040 Hb_007978_020--Hb_000617_040 Hb_003398_010 Hb_003398_010 Hb_007978_020--Hb_003398_010 Hb_000014_130--Hb_041237_010 Hb_002904_090 Hb_002904_090 Hb_000014_130--Hb_002904_090 Hb_000014_130--Hb_003398_010 Hb_050495_010 Hb_050495_010 Hb_167316_010--Hb_050495_010 Hb_167316_010--Hb_007978_020 Hb_004939_020 Hb_004939_020 Hb_167316_010--Hb_004939_020 Hb_054649_020 Hb_054649_020 Hb_167316_010--Hb_054649_020 Hb_001250_120 Hb_001250_120 Hb_167316_010--Hb_001250_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0844661 0.222382 0 0 0.0796748 0.323857
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis