Hb_000067_030

Information

Type -
Description -
Location Contig67: 122378-123355
Sequence    

Annotation

kegg
ID cit:102621748
description TMV resistance protein N-like
nr
ID KDP38828.1
description hypothetical protein JCGZ_04985 [Jatropha curcas]
swissprot
ID Q40392
description TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
trembl
ID A0A067KV39
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04985 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000067_030 0.0 - - hypothetical protein JCGZ_04985 [Jatropha curcas]
2 Hb_003106_210 0.1323303886 - - PREDICTED: UDP-glycosyltransferase 74B1-like [Jatropha curcas]
3 Hb_003142_090 0.1326288822 - - Kinase, putative isoform 2 [Theobroma cacao]
4 Hb_001365_050 0.1432244622 - - hypothetical protein POPTR_0019s128601g, partial [Populus trichocarpa]
5 Hb_006501_170 0.1522810856 - - hypothetical protein JCGZ_07371 [Jatropha curcas]
6 Hb_006718_040 0.153302813 - - PREDICTED: starch synthase 3, chloroplastic/amyloplastic isoform X1 [Jatropha curcas]
7 Hb_001140_320 0.1596513643 - - PREDICTED: oxalate--CoA ligase [Jatropha curcas]
8 Hb_006316_030 0.1659426618 - - aldehyde oxidase, putative [Ricinus communis]
9 Hb_011214_140 0.1695319135 - - Ran GTPase binding protein, putative [Ricinus communis]
10 Hb_002218_070 0.1747753727 - - PREDICTED: myosin-binding protein 1 [Jatropha curcas]
11 Hb_002518_270 0.177049287 - - glycogen phosphorylase, putative [Ricinus communis]
12 Hb_003337_050 0.1775692548 - - PREDICTED: probable protein phosphatase 2C 78 [Jatropha curcas]
13 Hb_000141_010 0.1780851559 - - PREDICTED: uncharacterized protein LOC105632253 [Jatropha curcas]
14 Hb_003371_140 0.185109901 - - hypothetical protein POPTR_0001s23540g, partial [Populus trichocarpa]
15 Hb_004218_160 0.1851581605 - - NBS-LRR type disease resistance protein [Medicago truncatula]
16 Hb_008948_080 0.1855535581 - - PREDICTED: TBC1 domain family member 13-like isoform X1 [Jatropha curcas]
17 Hb_000668_160 0.1857984213 - - PREDICTED: sulfate transporter 1.3-like [Jatropha curcas]
18 Hb_002217_070 0.1859949131 - - PREDICTED: uncharacterized protein LOC105643596 [Jatropha curcas]
19 Hb_000527_070 0.1860139825 transcription factor TF Family: SNF2 PREDICTED: uncharacterized protein LOC105649495 [Jatropha curcas]
20 Hb_000723_120 0.1863685632 - - PREDICTED: UDP-glycosyltransferase 86A1 [Jatropha curcas]

Gene co-expression network

sample Hb_000067_030 Hb_000067_030 Hb_003106_210 Hb_003106_210 Hb_000067_030--Hb_003106_210 Hb_003142_090 Hb_003142_090 Hb_000067_030--Hb_003142_090 Hb_001365_050 Hb_001365_050 Hb_000067_030--Hb_001365_050 Hb_006501_170 Hb_006501_170 Hb_000067_030--Hb_006501_170 Hb_006718_040 Hb_006718_040 Hb_000067_030--Hb_006718_040 Hb_001140_320 Hb_001140_320 Hb_000067_030--Hb_001140_320 Hb_003106_210--Hb_001365_050 Hb_006316_030 Hb_006316_030 Hb_003106_210--Hb_006316_030 Hb_002218_070 Hb_002218_070 Hb_003106_210--Hb_002218_070 Hb_003106_210--Hb_006501_170 Hb_107543_010 Hb_107543_010 Hb_003106_210--Hb_107543_010 Hb_003371_140 Hb_003371_140 Hb_003142_090--Hb_003371_140 Hb_003142_090--Hb_006501_170 Hb_061350_010 Hb_061350_010 Hb_003142_090--Hb_061350_010 Hb_002518_270 Hb_002518_270 Hb_003142_090--Hb_002518_270 Hb_000126_040 Hb_000126_040 Hb_003142_090--Hb_000126_040 Hb_001365_050--Hb_006316_030 Hb_043768_010 Hb_043768_010 Hb_001365_050--Hb_043768_010 Hb_007919_030 Hb_007919_030 Hb_001365_050--Hb_007919_030 Hb_000377_160 Hb_000377_160 Hb_001365_050--Hb_000377_160 Hb_006501_170--Hb_002518_270 Hb_004218_160 Hb_004218_160 Hb_006501_170--Hb_004218_160 Hb_008948_080 Hb_008948_080 Hb_006501_170--Hb_008948_080 Hb_006501_170--Hb_003371_140 Hb_011214_140 Hb_011214_140 Hb_006501_170--Hb_011214_140 Hb_006718_040--Hb_003106_210 Hb_006718_040--Hb_002518_270 Hb_011174_100 Hb_011174_100 Hb_006718_040--Hb_011174_100 Hb_006718_040--Hb_006501_170 Hb_006718_040--Hb_002218_070 Hb_000575_090 Hb_000575_090 Hb_001140_320--Hb_000575_090 Hb_000836_560 Hb_000836_560 Hb_001140_320--Hb_000836_560 Hb_001374_040 Hb_001374_040 Hb_001140_320--Hb_001374_040 Hb_001140_320--Hb_007919_030 Hb_001140_320--Hb_001365_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0284464 1.08999 0.228377 0.157721 0 0.0253139
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0819571 0.0753144 0.758467 0.418481

CAGE analysis