Hb_000069_150

Information

Type -
Description -
Location Contig69: 128355-129573
Sequence    

Annotation

kegg
ID rcu:RCOM_0716950
description hypothetical protein
nr
ID XP_012083193.1
description PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
swissprot
ID Q9M160
description Uncharacterized protein At4g00950 OS=Arabidopsis thaliana GN=At4g00950 PE=2 SV=1
trembl
ID A0A067JX63
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14243 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54183: 128381-129389
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000069_150 0.0 - - PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
2 Hb_002869_090 0.1105450179 - - PREDICTED: dirigent protein 22-like [Jatropha curcas]
3 Hb_000659_050 0.1235022996 - - PREDICTED: basic blue protein-like [Jatropha curcas]
4 Hb_000327_100 0.1272020785 - - hypothetical protein JCGZ_06658 [Jatropha curcas]
5 Hb_001675_020 0.128466874 - - -
6 Hb_000561_040 0.1358455531 - - PREDICTED: dirigent protein 19-like [Jatropha curcas]
7 Hb_002616_020 0.1384168667 - - PREDICTED: peroxidase 3 [Jatropha curcas]
8 Hb_003304_090 0.1390629479 - - PREDICTED: uncharacterized protein LOC105633680 [Jatropha curcas]
9 Hb_000352_360 0.1424690192 - - PREDICTED: 4-coumarate--CoA ligase 1-like [Jatropha curcas]
10 Hb_007403_100 0.1436605742 - - PREDICTED: probable purple acid phosphatase 20 [Jatropha curcas]
11 Hb_027400_020 0.1446344137 - - PREDICTED: uncharacterized protein At5g22580 isoform X2 [Jatropha curcas]
12 Hb_000344_030 0.1507739818 - - phenylalanine ammonia-lyase 1 [Manihot esculenta]
13 Hb_000477_020 0.152065217 - - hypothetical protein EUGRSUZ_C011052, partial [Eucalyptus grandis]
14 Hb_002007_330 0.1525619099 - - PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [Jatropha curcas]
15 Hb_000076_280 0.1560796358 - - PREDICTED: pectinesterase-like [Populus euphratica]
16 Hb_000163_170 0.156815732 - - -
17 Hb_000389_100 0.1569930788 - - phenylalanine ammonia-lyase 1 [Manihot esculenta]
18 Hb_000419_140 0.1578923664 - - Aquaporin PIP2.1, putative [Ricinus communis]
19 Hb_000011_320 0.1601525827 - - PREDICTED: uncharacterized protein LOC105631328 [Jatropha curcas]
20 Hb_000897_010 0.1603523454 - - hypothetical protein JCGZ_13196 [Jatropha curcas]

Gene co-expression network

sample Hb_000069_150 Hb_000069_150 Hb_002869_090 Hb_002869_090 Hb_000069_150--Hb_002869_090 Hb_000659_050 Hb_000659_050 Hb_000069_150--Hb_000659_050 Hb_000327_100 Hb_000327_100 Hb_000069_150--Hb_000327_100 Hb_001675_020 Hb_001675_020 Hb_000069_150--Hb_001675_020 Hb_000561_040 Hb_000561_040 Hb_000069_150--Hb_000561_040 Hb_002616_020 Hb_002616_020 Hb_000069_150--Hb_002616_020 Hb_002869_090--Hb_000659_050 Hb_002869_090--Hb_002616_020 Hb_002869_090--Hb_000327_100 Hb_000352_360 Hb_000352_360 Hb_002869_090--Hb_000352_360 Hb_027400_020 Hb_027400_020 Hb_002869_090--Hb_027400_020 Hb_002869_090--Hb_000561_040 Hb_000910_030 Hb_000910_030 Hb_000659_050--Hb_000910_030 Hb_000344_030 Hb_000344_030 Hb_000659_050--Hb_000344_030 Hb_000659_050--Hb_000327_100 Hb_000659_050--Hb_001675_020 Hb_000659_050--Hb_002616_020 Hb_000327_100--Hb_001675_020 Hb_000327_100--Hb_000352_360 Hb_001856_260 Hb_001856_260 Hb_000327_100--Hb_001856_260 Hb_000477_020 Hb_000477_020 Hb_000327_100--Hb_000477_020 Hb_001675_020--Hb_000477_020 Hb_007403_100 Hb_007403_100 Hb_001675_020--Hb_007403_100 Hb_001675_020--Hb_002869_090 Hb_007237_060 Hb_007237_060 Hb_001675_020--Hb_007237_060 Hb_000389_100 Hb_000389_100 Hb_000561_040--Hb_000389_100 Hb_000561_040--Hb_000659_050 Hb_120357_010 Hb_120357_010 Hb_000561_040--Hb_120357_010 Hb_000561_040--Hb_027400_020 Hb_049438_020 Hb_049438_020 Hb_000561_040--Hb_049438_020 Hb_002616_020--Hb_000352_360 Hb_002616_020--Hb_027400_020 Hb_000076_280 Hb_000076_280 Hb_002616_020--Hb_000076_280 Hb_000419_140 Hb_000419_140 Hb_002616_020--Hb_000419_140 Hb_003849_170 Hb_003849_170 Hb_002616_020--Hb_003849_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.251719 0.288144 2.92255 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.110077 0.700207 0.488153

CAGE analysis