Hb_000069_210

Information

Type -
Description -
Location Contig69: 210076-215355
Sequence    

Annotation

kegg
ID rcu:RCOM_0716980
description importin-alpha re-exporter, putative
nr
ID XP_012083195.1
description PREDICTED: exportin-2 [Jatropha curcas]
swissprot
ID Q9ZPY7
description Exportin-2 OS=Arabidopsis thaliana GN=CAS PE=2 SV=1
trembl
ID A0A067K9H9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14245 PE=4 SV=1
Gene Ontology
ID GO:0005643
description importin-alpha re-exporter family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54189: 210338-214431
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000069_210 0.0 - - PREDICTED: exportin-2 [Jatropha curcas]
2 Hb_001876_010 0.0608271479 - - PREDICTED: arginyl-tRNA--protein transferase 2-like isoform X1 [Jatropha curcas]
3 Hb_007416_090 0.0642692512 - - UDP-sugar transporter, putative [Ricinus communis]
4 Hb_000095_080 0.0722824025 - - PREDICTED: probable U3 small nucleolar RNA-associated protein 7 [Jatropha curcas]
5 Hb_001789_150 0.0768803001 - - PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like isoform X1 [Jatropha curcas]
6 Hb_001936_130 0.0772496465 - - PREDICTED: signal recognition particle receptor subunit beta-like [Jatropha curcas]
7 Hb_000094_210 0.0801341508 - - glucose-6-phosphate isomerase, putative [Ricinus communis]
8 Hb_002908_050 0.0802536017 - - hypothetical protein CISIN_1g0022902mg, partial [Citrus sinensis]
9 Hb_012322_010 0.0834044243 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
10 Hb_000872_010 0.0835143828 - - PREDICTED: putative ubiquitin-conjugating enzyme E2 38 [Jatropha curcas]
11 Hb_000140_280 0.0841411562 - - hypothetical protein B456_001G157900 [Gossypium raimondii]
12 Hb_000976_100 0.0849433142 - - eukaryotic translation elongation factor, putative [Ricinus communis]
13 Hb_003994_150 0.0854420046 - - PREDICTED: pyrophosphate-energized membrane proton pump 2 [Jatropha curcas]
14 Hb_009569_040 0.0855885874 - - PREDICTED: uncharacterized protein LOC105635573 [Jatropha curcas]
15 Hb_007638_030 0.0863513942 - - PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN [Jatropha curcas]
16 Hb_000656_010 0.0864594354 - - PREDICTED: uncharacterized protein LOC105631354 isoform X1 [Jatropha curcas]
17 Hb_009296_040 0.0867024221 - - hypothetical protein L484_007435 [Morus notabilis]
18 Hb_003206_110 0.0873311697 - - Putative 1-aminocyclopropane-1-carboxylate deaminase [Gossypium arboreum]
19 Hb_010142_020 0.0876377555 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000011_060 0.0882408961 - - PREDICTED: exportin-7 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000069_210 Hb_000069_210 Hb_001876_010 Hb_001876_010 Hb_000069_210--Hb_001876_010 Hb_007416_090 Hb_007416_090 Hb_000069_210--Hb_007416_090 Hb_000095_080 Hb_000095_080 Hb_000069_210--Hb_000095_080 Hb_001789_150 Hb_001789_150 Hb_000069_210--Hb_001789_150 Hb_001936_130 Hb_001936_130 Hb_000069_210--Hb_001936_130 Hb_000094_210 Hb_000094_210 Hb_000069_210--Hb_000094_210 Hb_000011_060 Hb_000011_060 Hb_001876_010--Hb_000011_060 Hb_002908_050 Hb_002908_050 Hb_001876_010--Hb_002908_050 Hb_000189_550 Hb_000189_550 Hb_001876_010--Hb_000189_550 Hb_000028_390 Hb_000028_390 Hb_001876_010--Hb_000028_390 Hb_000984_170 Hb_000984_170 Hb_001876_010--Hb_000984_170 Hb_001898_080 Hb_001898_080 Hb_007416_090--Hb_001898_080 Hb_000116_270 Hb_000116_270 Hb_007416_090--Hb_000116_270 Hb_007416_090--Hb_001789_150 Hb_149985_010 Hb_149985_010 Hb_007416_090--Hb_149985_010 Hb_007416_090--Hb_000095_080 Hb_000072_320 Hb_000072_320 Hb_000095_080--Hb_000072_320 Hb_001999_310 Hb_001999_310 Hb_000095_080--Hb_001999_310 Hb_001016_120 Hb_001016_120 Hb_000095_080--Hb_001016_120 Hb_000656_010 Hb_000656_010 Hb_000095_080--Hb_000656_010 Hb_000012_310 Hb_000012_310 Hb_001789_150--Hb_000012_310 Hb_000574_450 Hb_000574_450 Hb_001789_150--Hb_000574_450 Hb_010515_020 Hb_010515_020 Hb_001789_150--Hb_010515_020 Hb_000497_300 Hb_000497_300 Hb_001789_150--Hb_000497_300 Hb_001352_020 Hb_001352_020 Hb_001789_150--Hb_001352_020 Hb_004480_100 Hb_004480_100 Hb_001789_150--Hb_004480_100 Hb_001004_070 Hb_001004_070 Hb_001936_130--Hb_001004_070 Hb_027380_220 Hb_027380_220 Hb_001936_130--Hb_027380_220 Hb_091296_010 Hb_091296_010 Hb_001936_130--Hb_091296_010 Hb_003025_100 Hb_003025_100 Hb_001936_130--Hb_003025_100 Hb_012498_010 Hb_012498_010 Hb_001936_130--Hb_012498_010 Hb_000260_010 Hb_000260_010 Hb_001936_130--Hb_000260_010 Hb_002631_010 Hb_002631_010 Hb_000094_210--Hb_002631_010 Hb_000094_210--Hb_007416_090 Hb_001085_240 Hb_001085_240 Hb_000094_210--Hb_001085_240 Hb_003633_050 Hb_003633_050 Hb_000094_210--Hb_003633_050 Hb_000025_190 Hb_000025_190 Hb_000094_210--Hb_000025_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.42509 4.16039 3.40942 11.3412 4.99638 6.98775
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.74109 5.24557 8.43039 9.93855 9.0789

CAGE analysis