Hb_000069_480

Information

Type -
Description -
Location Contig69: 516377-519139
Sequence    

Annotation

kegg
ID rcu:RCOM_0719410
description hypothetical protein
nr
ID XP_002523369.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q84MC7
description Abscisic acid receptor PYL9 OS=Arabidopsis thaliana GN=PYL9 PE=1 SV=1
trembl
ID B9SBK0
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0719410 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54245: 516271-519118 , PASA_asmbl_54246: 517834-518084 , PASA_asmbl_54247: 518091-518334
cDNA
(Sanger)
(ID:Location)		 036_F08.ab1: 516309-518740 , 046_B23.ab1: 516271-518638 , 048_L09.ab1: 516281-518681 , 050_J23.ab1: 516391-518732

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000069_480 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_003912_040 0.071385694 - - hypothetical protein CISIN_1g005153mg [Citrus sinensis]
3 Hb_004128_130 0.075372209 - - PREDICTED: protein MODIFIER OF SNC1 11 isoform X1 [Jatropha curcas]
4 Hb_004429_010 0.0784472512 - - calcineurin-like phosphoesterase [Manihot esculenta]
5 Hb_001489_100 0.0791904768 - - PREDICTED: hypersensitive-induced response protein 2 [Jatropha curcas]
6 Hb_008253_020 0.0794495706 - - PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like [Jatropha curcas]
7 Hb_000418_010 0.0800401035 - - PREDICTED: repressor of RNA polymerase III transcription MAF1 homolog [Jatropha curcas]
8 Hb_000139_130 0.0804789796 - - PREDICTED: chloride channel protein CLC-d isoform X1 [Jatropha curcas]
9 Hb_010315_020 0.0809608681 - - PREDICTED: uncharacterized protein LOC105640834 [Jatropha curcas]
10 Hb_000588_080 0.0811167062 - - PREDICTED: uncharacterized protein LOC105638459 [Jatropha curcas]
11 Hb_001408_110 0.081157696 - - hypothetical protein EUGRSUZ_I02762 [Eucalyptus grandis]
12 Hb_009252_050 0.0811729032 - - protein binding protein, putative [Ricinus communis]
13 Hb_000069_130 0.0811810358 - - PREDICTED: uncharacterized protein LOC105642829 isoform X1 [Jatropha curcas]
14 Hb_003943_010 0.0815629832 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000008_240 0.0819384009 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000445_470 0.0829002791 - - PREDICTED: RING finger and transmembrane domain-containing protein 1-like [Jatropha curcas]
17 Hb_000046_570 0.0838724221 - - hypothetical protein JCGZ_01998 [Jatropha curcas]
18 Hb_004204_130 0.0843139798 - - PREDICTED: uncharacterized protein LOC103930912 [Pyrus x bretschneideri]
19 Hb_004143_100 0.0845911379 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000479_240 0.0851172265 - - PREDICTED: probable ubiquitin conjugation factor E4 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000069_480 Hb_000069_480 Hb_003912_040 Hb_003912_040 Hb_000069_480--Hb_003912_040 Hb_004128_130 Hb_004128_130 Hb_000069_480--Hb_004128_130 Hb_004429_010 Hb_004429_010 Hb_000069_480--Hb_004429_010 Hb_001489_100 Hb_001489_100 Hb_000069_480--Hb_001489_100 Hb_008253_020 Hb_008253_020 Hb_000069_480--Hb_008253_020 Hb_000418_010 Hb_000418_010 Hb_000069_480--Hb_000418_010 Hb_000069_130 Hb_000069_130 Hb_003912_040--Hb_000069_130 Hb_000046_570 Hb_000046_570 Hb_003912_040--Hb_000046_570 Hb_002492_010 Hb_002492_010 Hb_003912_040--Hb_002492_010 Hb_007062_040 Hb_007062_040 Hb_003912_040--Hb_007062_040 Hb_008226_090 Hb_008226_090 Hb_003912_040--Hb_008226_090 Hb_000120_910 Hb_000120_910 Hb_003912_040--Hb_000120_910 Hb_000089_180 Hb_000089_180 Hb_004128_130--Hb_000089_180 Hb_004143_100 Hb_004143_100 Hb_004128_130--Hb_004143_100 Hb_004128_130--Hb_000046_570 Hb_015026_130 Hb_015026_130 Hb_004128_130--Hb_015026_130 Hb_004109_230 Hb_004109_230 Hb_004128_130--Hb_004109_230 Hb_000521_330 Hb_000521_330 Hb_004128_130--Hb_000521_330 Hb_002027_280 Hb_002027_280 Hb_004429_010--Hb_002027_280 Hb_002092_070 Hb_002092_070 Hb_004429_010--Hb_002092_070 Hb_009252_050 Hb_009252_050 Hb_004429_010--Hb_009252_050 Hb_003124_160 Hb_003124_160 Hb_004429_010--Hb_003124_160 Hb_002284_170 Hb_002284_170 Hb_004429_010--Hb_002284_170 Hb_001221_090 Hb_001221_090 Hb_004429_010--Hb_001221_090 Hb_000580_030 Hb_000580_030 Hb_001489_100--Hb_000580_030 Hb_001489_100--Hb_002284_170 Hb_008937_010 Hb_008937_010 Hb_001489_100--Hb_008937_010 Hb_001033_050 Hb_001033_050 Hb_001489_100--Hb_001033_050 Hb_001489_100--Hb_008253_020 Hb_001135_120 Hb_001135_120 Hb_001489_100--Hb_001135_120 Hb_004129_070 Hb_004129_070 Hb_008253_020--Hb_004129_070 Hb_000402_230 Hb_000402_230 Hb_008253_020--Hb_000402_230 Hb_007810_110 Hb_007810_110 Hb_008253_020--Hb_007810_110 Hb_002276_240 Hb_002276_240 Hb_008253_020--Hb_002276_240 Hb_001089_050 Hb_001089_050 Hb_008253_020--Hb_001089_050 Hb_000009_500 Hb_000009_500 Hb_008253_020--Hb_000009_500 Hb_000197_030 Hb_000197_030 Hb_000418_010--Hb_000197_030 Hb_000671_080 Hb_000671_080 Hb_000418_010--Hb_000671_080 Hb_001257_100 Hb_001257_100 Hb_000418_010--Hb_001257_100 Hb_000418_010--Hb_001489_100 Hb_006198_020 Hb_006198_020 Hb_000418_010--Hb_006198_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
41.2994 77.1165 41.6148 69.3238 35.6035 45.434
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
31.0941 23.4611 18.0089 39.8663 45.4379

CAGE analysis