Hb_000069_600

Information

Type -
Description -
Location Contig69: 661860-666935
Sequence    

Annotation

kegg
ID rcu:RCOM_0149870
description Grave disease carrier protein, putative
nr
ID XP_012083252.1
description PREDICTED: mitochondrial adenine nucleotide transporter ADNT1 [Jatropha curcas]
swissprot
ID O04619
description Mitochondrial adenine nucleotide transporter ADNT1 OS=Arabidopsis thaliana GN=ADNT1 PE=2 SV=1
trembl
ID A0A067JX18
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14287 PE=3 SV=1
Gene Ontology
ID GO:0016021
description mitochondrial adenine nucleotide transporter adnt1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54271: 661834-666855
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000069_600 0.0 - - PREDICTED: mitochondrial adenine nucleotide transporter ADNT1 [Jatropha curcas]
2 Hb_001983_020 0.078213264 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Jatropha curcas]
3 Hb_022181_020 0.0916183727 - - PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase isoform X1 [Jatropha curcas]
4 Hb_035273_030 0.097258392 rubber biosynthesis Gene Name: Mevalonate kinase mevalonate kinase [Hevea brasiliensis]
5 Hb_000958_110 0.0980550834 - - PREDICTED: uncharacterized protein LOC105628719 isoform X1 [Jatropha curcas]
6 Hb_003050_220 0.1029809192 - - hypothetical protein JCGZ_04601 [Jatropha curcas]
7 Hb_089995_010 0.1033958685 - - PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U protein-like [Eucalyptus grandis]
8 Hb_000010_460 0.1052260008 - - hypothetical protein EUGRSUZ_B001502, partial [Eucalyptus grandis]
9 Hb_000053_100 0.1055972936 - - PREDICTED: uncharacterized protein LOC105642071 [Jatropha curcas]
10 Hb_010174_060 0.1058890121 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]
11 Hb_000329_630 0.1072907063 - - PREDICTED: nuclear pore complex protein NUP62 [Jatropha curcas]
12 Hb_001545_080 0.107704348 - - PREDICTED: tRNA pseudouridine(38/39) synthase isoform X3 [Jatropha curcas]
13 Hb_000668_040 0.1086388798 - - PREDICTED: random slug protein 5-like [Jatropha curcas]
14 Hb_000445_420 0.1111247793 - - protein transporter, putative [Ricinus communis]
15 Hb_001902_140 0.1121542058 - - PREDICTED: uncharacterized protein LOC105648457 isoform X2 [Jatropha curcas]
16 Hb_000260_810 0.114219863 - - -
17 Hb_000123_170 0.1148275887 - - Rab3 [Hevea brasiliensis]
18 Hb_000679_010 0.1148279648 - - PREDICTED: uncharacterized protein LOC105637663 [Jatropha curcas]
19 Hb_172426_040 0.1162980903 - - PREDICTED: ELL-associated factor 1 [Jatropha curcas]
20 Hb_000977_110 0.1163730665 - - PREDICTED: LETM1 and EF-hand domain-containing protein 1, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_000069_600 Hb_000069_600 Hb_001983_020 Hb_001983_020 Hb_000069_600--Hb_001983_020 Hb_022181_020 Hb_022181_020 Hb_000069_600--Hb_022181_020 Hb_035273_030 Hb_035273_030 Hb_000069_600--Hb_035273_030 Hb_000958_110 Hb_000958_110 Hb_000069_600--Hb_000958_110 Hb_003050_220 Hb_003050_220 Hb_000069_600--Hb_003050_220 Hb_089995_010 Hb_089995_010 Hb_000069_600--Hb_089995_010 Hb_000679_010 Hb_000679_010 Hb_001983_020--Hb_000679_010 Hb_000212_330 Hb_000212_330 Hb_001983_020--Hb_000212_330 Hb_032202_190 Hb_032202_190 Hb_001983_020--Hb_032202_190 Hb_172426_040 Hb_172426_040 Hb_001983_020--Hb_172426_040 Hb_001983_020--Hb_000958_110 Hb_022181_020--Hb_035273_030 Hb_002374_100 Hb_002374_100 Hb_022181_020--Hb_002374_100 Hb_000445_420 Hb_000445_420 Hb_022181_020--Hb_000445_420 Hb_000111_360 Hb_000111_360 Hb_022181_020--Hb_000111_360 Hb_002769_050 Hb_002769_050 Hb_022181_020--Hb_002769_050 Hb_005433_040 Hb_005433_040 Hb_035273_030--Hb_005433_040 Hb_035273_030--Hb_001983_020 Hb_003732_020 Hb_003732_020 Hb_035273_030--Hb_003732_020 Hb_001100_060 Hb_001100_060 Hb_035273_030--Hb_001100_060 Hb_000958_110--Hb_003050_220 Hb_000015_040 Hb_000015_040 Hb_000958_110--Hb_000015_040 Hb_000002_340 Hb_000002_340 Hb_000958_110--Hb_000002_340 Hb_002232_410 Hb_002232_410 Hb_000958_110--Hb_002232_410 Hb_003151_040 Hb_003151_040 Hb_000958_110--Hb_003151_040 Hb_017224_030 Hb_017224_030 Hb_000958_110--Hb_017224_030 Hb_001579_220 Hb_001579_220 Hb_003050_220--Hb_001579_220 Hb_001902_140 Hb_001902_140 Hb_003050_220--Hb_001902_140 Hb_003050_220--Hb_000015_040 Hb_003050_220--Hb_032202_190 Hb_002107_030 Hb_002107_030 Hb_003050_220--Hb_002107_030 Hb_005391_040 Hb_005391_040 Hb_089995_010--Hb_005391_040 Hb_005245_080 Hb_005245_080 Hb_089995_010--Hb_005245_080 Hb_006907_130 Hb_006907_130 Hb_089995_010--Hb_006907_130 Hb_089995_010--Hb_172426_040 Hb_003918_010 Hb_003918_010 Hb_089995_010--Hb_003918_010 Hb_089995_010--Hb_000015_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
54.5206 24.9251 26.7371 29.3518 23.9925 36.7231
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
107.991 48.8945 66.9189 45.0729 34.4579

CAGE analysis