Hb_000070_080

Information

Type -
Description -
Location Contig70: 142316-147810
Sequence    

Annotation

kegg
ID rcu:RCOM_1689270
description hypothetical protein
nr
ID XP_012086811.1
description PREDICTED: uncharacterized protein LOC105645742 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JRD1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20529 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54784: 142291-144537
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000070_080 0.0 - - PREDICTED: uncharacterized protein LOC105645742 isoform X2 [Jatropha curcas]
2 Hb_008511_090 0.0546352831 - - PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Jatropha curcas]
3 Hb_008103_060 0.0570678983 - - PREDICTED: glycylpeptide N-tetradecanoyltransferase 1 [Jatropha curcas]
4 Hb_000479_220 0.0581221249 - - PREDICTED: uncharacterized protein LOC105644125 [Jatropha curcas]
5 Hb_000162_280 0.0597648467 - - PREDICTED: CTL-like protein DDB_G0288717 [Populus euphratica]
6 Hb_002078_110 0.0602304605 - - PREDICTED: nuclear pore complex protein NUP54 [Jatropha curcas]
7 Hb_002078_220 0.0628696175 - - PREDICTED: CTD small phosphatase-like protein 2 isoform X1 [Jatropha curcas]
8 Hb_003640_040 0.0670695775 - - PREDICTED: uncharacterized protein LOC105647348 [Jatropha curcas]
9 Hb_000680_090 0.0686807587 - - Protein SEY1, putative [Ricinus communis]
10 Hb_002043_140 0.0698030143 - - PREDICTED: uncharacterized protein At1g51745-like [Jatropha curcas]
11 Hb_003373_040 0.0700263276 - - hypothetical protein ARALYDRAFT_356474 [Arabidopsis lyrata subsp. lyrata]
12 Hb_004195_200 0.0700571617 - - glycosyl transferase family 1 family protein [Populus trichocarpa]
13 Hb_000366_120 0.0702514543 - - PREDICTED: chaperone protein dnaJ 49-like [Jatropha curcas]
14 Hb_000076_160 0.0705499616 - - PREDICTED: AP-5 complex subunit zeta-1 [Jatropha curcas]
15 Hb_000309_040 0.0716111988 - - PREDICTED: protein farnesyltransferase subunit beta isoform X1 [Jatropha curcas]
16 Hb_004109_030 0.0719825793 - - conserved hypothetical protein [Ricinus communis]
17 Hb_111198_010 0.0722868446 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 37-like isoform X1 [Jatropha curcas]
18 Hb_020831_030 0.0730964559 - - conserved hypothetical protein [Ricinus communis]
19 Hb_006615_120 0.0736805122 - - PREDICTED: uncharacterized protein LOC105640682 [Jatropha curcas]
20 Hb_004357_020 0.0739372124 - - PREDICTED: uncharacterized protein LOC105637355 [Jatropha curcas]

Gene co-expression network

sample Hb_000070_080 Hb_000070_080 Hb_008511_090 Hb_008511_090 Hb_000070_080--Hb_008511_090 Hb_008103_060 Hb_008103_060 Hb_000070_080--Hb_008103_060 Hb_000479_220 Hb_000479_220 Hb_000070_080--Hb_000479_220 Hb_000162_280 Hb_000162_280 Hb_000070_080--Hb_000162_280 Hb_002078_110 Hb_002078_110 Hb_000070_080--Hb_002078_110 Hb_002078_220 Hb_002078_220 Hb_000070_080--Hb_002078_220 Hb_004109_030 Hb_004109_030 Hb_008511_090--Hb_004109_030 Hb_001005_190 Hb_001005_190 Hb_008511_090--Hb_001005_190 Hb_007163_120 Hb_007163_120 Hb_008511_090--Hb_007163_120 Hb_008511_090--Hb_000479_220 Hb_008511_090--Hb_002078_220 Hb_140049_040 Hb_140049_040 Hb_008103_060--Hb_140049_040 Hb_007635_030 Hb_007635_030 Hb_008103_060--Hb_007635_030 Hb_004195_200 Hb_004195_200 Hb_008103_060--Hb_004195_200 Hb_002876_130 Hb_002876_130 Hb_008103_060--Hb_002876_130 Hb_002043_140 Hb_002043_140 Hb_008103_060--Hb_002043_140 Hb_008253_030 Hb_008253_030 Hb_000479_220--Hb_008253_030 Hb_138596_010 Hb_138596_010 Hb_000479_220--Hb_138596_010 Hb_002615_090 Hb_002615_090 Hb_000479_220--Hb_002615_090 Hb_002253_080 Hb_002253_080 Hb_000479_220--Hb_002253_080 Hb_002843_120 Hb_002843_120 Hb_000479_220--Hb_002843_120 Hb_009112_010 Hb_009112_010 Hb_000162_280--Hb_009112_010 Hb_006615_120 Hb_006615_120 Hb_000162_280--Hb_006615_120 Hb_003633_070 Hb_003633_070 Hb_000162_280--Hb_003633_070 Hb_000116_060 Hb_000116_060 Hb_000162_280--Hb_000116_060 Hb_000680_090 Hb_000680_090 Hb_000162_280--Hb_000680_090 Hb_002835_230 Hb_002835_230 Hb_002078_110--Hb_002835_230 Hb_002686_250 Hb_002686_250 Hb_002078_110--Hb_002686_250 Hb_131646_010 Hb_131646_010 Hb_002078_110--Hb_131646_010 Hb_000309_040 Hb_000309_040 Hb_002078_110--Hb_000309_040 Hb_000928_220 Hb_000928_220 Hb_002078_110--Hb_000928_220 Hb_000886_050 Hb_000886_050 Hb_002078_220--Hb_000886_050 Hb_000076_160 Hb_000076_160 Hb_002078_220--Hb_000076_160 Hb_002078_220--Hb_008103_060 Hb_002078_220--Hb_002876_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.5182 12.9206 7.56761 7.88952 10.1314 10.2847
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.31108 6.78663 8.0185 7.56748 4.10045

CAGE analysis