Hb_000072_120

Information

Type -
Description -
Location Contig72: 262885-263715
Sequence    

Annotation

kegg
ID rcu:RCOM_1146390
description serine/threonine protein kinase, putative (EC:2.7.11.1)
nr
ID XP_002530422.1
description serine/threonine protein kinase, putative [Ricinus communis]
swissprot
ID Q39183
description Serine/threonine-protein kinase D6PKL2 OS=Arabidopsis thaliana GN=D6PKL2 PE=1 SV=1
trembl
ID B9SWQ3
description Serine/threonine protein kinase, putative OS=Ricinus communis GN=RCOM_1146390 PE=4 SV=1
Gene Ontology
ID GO:0004674
description serine threonine-protein kinase d6pkl2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55581: 262528-267752
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000072_120 0.0 - - serine/threonine protein kinase, putative [Ricinus communis]
2 Hb_001473_160 0.0458933229 - - Vesicle-associated membrane protein, putative [Ricinus communis]
3 Hb_000329_230 0.0606114607 - - PREDICTED: uncharacterized protein LOC105643152 [Jatropha curcas]
4 Hb_003906_200 0.0624196679 - - PREDICTED: zinc finger CCCH domain-containing protein 48 [Jatropha curcas]
5 Hb_001674_030 0.0698890886 - - PREDICTED: BTB/POZ domain-containing protein At2g24240 [Jatropha curcas]
6 Hb_004030_080 0.073007594 - - hypothetical protein JCGZ_25110 [Jatropha curcas]
7 Hb_001679_050 0.0730410659 - - PREDICTED: exocyst complex component EXO84B [Jatropha curcas]
8 Hb_000637_110 0.0736431714 - - hypothetical protein B456_013G081300 [Gossypium raimondii]
9 Hb_005137_040 0.0738519691 - - hypothetical protein JCGZ_12324 [Jatropha curcas]
10 Hb_011016_050 0.0778726718 - - PREDICTED: probable E3 ubiquitin-protein ligase ARI7 isoform X1 [Jatropha curcas]
11 Hb_000088_170 0.079118698 - - PREDICTED: ran-binding protein 10-like [Jatropha curcas]
12 Hb_000083_120 0.0796351271 - - transcription factor, putative [Ricinus communis]
13 Hb_003617_020 0.0800771115 - - PREDICTED: uncharacterized protein LOC105638179 [Jatropha curcas]
14 Hb_001716_020 0.0808339178 - - hydrolase, putative [Ricinus communis]
15 Hb_000069_310 0.0814046863 - - ubiquitin ligase [Cucumis melo subsp. melo]
16 Hb_000347_400 0.0814502399 - - PREDICTED: probable GTP diphosphokinase RSH2, chloroplastic [Jatropha curcas]
17 Hb_000192_080 0.0819211105 - - PREDICTED: serine/threonine-protein kinase SAPK3 isoform X1 [Jatropha curcas]
18 Hb_000487_270 0.0825959291 - - hypothetical protein JCGZ_22651 [Jatropha curcas]
19 Hb_003544_110 0.0841450056 - - PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Jatropha curcas]
20 Hb_000349_260 0.0845288649 - - PREDICTED: transmembrane protein 64 [Jatropha curcas]

Gene co-expression network

sample Hb_000072_120 Hb_000072_120 Hb_001473_160 Hb_001473_160 Hb_000072_120--Hb_001473_160 Hb_000329_230 Hb_000329_230 Hb_000072_120--Hb_000329_230 Hb_003906_200 Hb_003906_200 Hb_000072_120--Hb_003906_200 Hb_001674_030 Hb_001674_030 Hb_000072_120--Hb_001674_030 Hb_004030_080 Hb_004030_080 Hb_000072_120--Hb_004030_080 Hb_001679_050 Hb_001679_050 Hb_000072_120--Hb_001679_050 Hb_001473_160--Hb_000329_230 Hb_000637_110 Hb_000637_110 Hb_001473_160--Hb_000637_110 Hb_002028_210 Hb_002028_210 Hb_001473_160--Hb_002028_210 Hb_001473_160--Hb_003906_200 Hb_093458_040 Hb_093458_040 Hb_001473_160--Hb_093458_040 Hb_003617_020 Hb_003617_020 Hb_000329_230--Hb_003617_020 Hb_000390_250 Hb_000390_250 Hb_000329_230--Hb_000390_250 Hb_000329_230--Hb_003906_200 Hb_000329_230--Hb_001674_030 Hb_112198_010 Hb_112198_010 Hb_003906_200--Hb_112198_010 Hb_002492_010 Hb_002492_010 Hb_003906_200--Hb_002492_010 Hb_004143_100 Hb_004143_100 Hb_003906_200--Hb_004143_100 Hb_003544_060 Hb_003544_060 Hb_003906_200--Hb_003544_060 Hb_007850_090 Hb_007850_090 Hb_001674_030--Hb_007850_090 Hb_001674_030--Hb_003906_200 Hb_000009_500 Hb_000009_500 Hb_001674_030--Hb_000009_500 Hb_000402_230 Hb_000402_230 Hb_001674_030--Hb_000402_230 Hb_002830_010 Hb_002830_010 Hb_004030_080--Hb_002830_010 Hb_000984_170 Hb_000984_170 Hb_004030_080--Hb_000984_170 Hb_005582_040 Hb_005582_040 Hb_004030_080--Hb_005582_040 Hb_006452_120 Hb_006452_120 Hb_004030_080--Hb_006452_120 Hb_000028_130 Hb_000028_130 Hb_004030_080--Hb_000028_130 Hb_011016_050 Hb_011016_050 Hb_004030_080--Hb_011016_050 Hb_002989_020 Hb_002989_020 Hb_001679_050--Hb_002989_020 Hb_011063_050 Hb_011063_050 Hb_001679_050--Hb_011063_050 Hb_000340_530 Hb_000340_530 Hb_001679_050--Hb_000340_530 Hb_004990_010 Hb_004990_010 Hb_001679_050--Hb_004990_010 Hb_008279_040 Hb_008279_040 Hb_001679_050--Hb_008279_040 Hb_000574_450 Hb_000574_450 Hb_001679_050--Hb_000574_450
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.2429 37.746 23.7618 42.7395 19.95 28.675
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
22.0158 22.3591 37.5595 28.1766 22.1685

CAGE analysis