Hb_000073_070

Information

Type -
Description -
Location Contig73: 284043-286022
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000073_070 0.0 - - -
2 Hb_000495_090 0.0010776004 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
3 Hb_105632_010 0.0071152832 - - -
4 Hb_005743_020 0.0071336056 - - -
5 Hb_002893_140 0.0257488748 - - Glycine-rich cell wall structural protein precursor, putative [Ricinus communis]
6 Hb_001274_060 0.0386739912 - - PREDICTED: uncharacterized protein LOC105802656 [Gossypium raimondii]
7 Hb_000160_340 0.0415538132 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
8 Hb_000380_030 0.0435407546 - - Kiwellin, putative [Ricinus communis]
9 Hb_000787_120 0.0458227616 - - 2S sulfur-rich seed storage protein precursor large subunit, putative [Ricinus communis]
10 Hb_003633_110 0.0470012229 - - hypothetical protein PRUPE_ppa019329mg [Prunus persica]
11 Hb_003767_020 0.050518396 - - PREDICTED: MLP-like protein 43 [Fragaria vesca subsp. vesca]
12 Hb_001459_070 0.0509929892 - - -
13 Hb_107725_010 0.056238053 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
14 Hb_000116_340 0.0747806386 - - PREDICTED: small acidic protein 1 [Jatropha curcas]
15 Hb_055235_010 0.0781364708 - - UDP-glucosyltransferase, putative [Ricinus communis]
16 Hb_182291_020 0.0782251687 - - hypothetical protein CICLE_v10029871mg [Citrus clementina]
17 Hb_007970_030 0.0812202093 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like isoform X1 [Jatropha curcas]
18 Hb_003813_150 0.1170046204 - - hypothetical protein POPTR_0004s09690g [Populus trichocarpa]
19 Hb_028707_060 0.1183807976 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC101308915 [Fragaria vesca subsp. vesca]
20 Hb_034468_010 0.1195772604 - - hypothetical protein EUGRSUZ_A02374 [Eucalyptus grandis]

Gene co-expression network

sample Hb_000073_070 Hb_000073_070 Hb_000495_090 Hb_000495_090 Hb_000073_070--Hb_000495_090 Hb_105632_010 Hb_105632_010 Hb_000073_070--Hb_105632_010 Hb_005743_020 Hb_005743_020 Hb_000073_070--Hb_005743_020 Hb_002893_140 Hb_002893_140 Hb_000073_070--Hb_002893_140 Hb_001274_060 Hb_001274_060 Hb_000073_070--Hb_001274_060 Hb_000160_340 Hb_000160_340 Hb_000073_070--Hb_000160_340 Hb_000495_090--Hb_105632_010 Hb_000495_090--Hb_005743_020 Hb_000495_090--Hb_002893_140 Hb_000495_090--Hb_001274_060 Hb_000380_030 Hb_000380_030 Hb_000495_090--Hb_000380_030 Hb_105632_010--Hb_005743_020 Hb_105632_010--Hb_001274_060 Hb_105632_010--Hb_002893_140 Hb_105632_010--Hb_000380_030 Hb_005743_020--Hb_001274_060 Hb_005743_020--Hb_002893_140 Hb_005743_020--Hb_000380_030 Hb_002893_140--Hb_000160_340 Hb_003767_020 Hb_003767_020 Hb_002893_140--Hb_003767_020 Hb_001274_060--Hb_000380_030 Hb_000787_120 Hb_000787_120 Hb_001274_060--Hb_000787_120 Hb_003633_110 Hb_003633_110 Hb_001274_060--Hb_003633_110 Hb_001459_070 Hb_001459_070 Hb_001274_060--Hb_001459_070 Hb_107725_010 Hb_107725_010 Hb_001274_060--Hb_107725_010 Hb_000160_340--Hb_003767_020 Hb_000116_340 Hb_000116_340 Hb_000160_340--Hb_000116_340 Hb_182291_020 Hb_182291_020 Hb_000160_340--Hb_182291_020 Hb_007970_030 Hb_007970_030 Hb_000160_340--Hb_007970_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0255254 0.0728966 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis