Hb_000075_030

Information

Type -
Description -
Location Contig75: 70926-75672
Sequence    

Annotation

kegg
ID fve:101310037
description aldo-keto reductase family 4 member C10-like
nr
ID XP_004302710.1
description PREDICTED: aldo-keto reductase family 4 member C10-like [Fragaria vesca subsp. vesca]
swissprot
ID Q0PGJ6
description Aldo-keto reductase family 4 member C9 OS=Arabidopsis thaliana GN=AKR4C9 PE=1 SV=1
trembl
ID A0A067JKP7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25120 PE=4 SV=1
Gene Ontology
ID GO:0009507
description aldo-keto reductase family 4 member c9-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56829: 71003-72130
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000075_030 0.0 - - PREDICTED: aldo-keto reductase family 4 member C10-like [Fragaria vesca subsp. vesca]
2 Hb_001005_210 0.0590733124 - - PREDICTED: chalcone synthase 3 [Jatropha curcas]
3 Hb_032631_080 0.0860787952 - - PREDICTED: L-Ala-D/L-amino acid epimerase-like isoform X2 [Jatropha curcas]
4 Hb_001691_060 0.088081599 - - lipoxygenase, putative [Ricinus communis]
5 Hb_002218_040 0.098507802 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000917_330 0.1089897344 - - PREDICTED: leucoanthocyanidin reductase-like [Jatropha curcas]
7 Hb_001922_010 0.113527171 - - PREDICTED: ABC transporter G family member 8 [Jatropha curcas]
8 Hb_028927_010 0.118593847 - - leucine-rich repeat protein, putative [Ricinus communis]
9 Hb_004881_080 0.1278002217 - - PREDICTED: glycerol-3-phosphate acyltransferase 1 [Populus euphratica]
10 Hb_007017_120 0.1280431923 - - PREDICTED: exocyst complex component EXO84A [Jatropha curcas]
11 Hb_007101_210 0.1289927274 - - UDP-glucosyltransferase, putative [Ricinus communis]
12 Hb_000566_110 0.1328208516 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 75 [Prunus mume]
13 Hb_000625_130 0.1328866497 - - PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Jatropha curcas]
14 Hb_001936_030 0.1355805709 - - PREDICTED: polygalacturonase At1g48100 isoform X1 [Jatropha curcas]
15 Hb_001004_130 0.1376872043 - - PREDICTED: chalcone synthase 3 [Jatropha curcas]
16 Hb_001279_220 0.1382737777 - - protein binding protein, putative [Ricinus communis]
17 Hb_003166_020 0.139734395 - - PREDICTED: RNA-binding E3 ubiquitin-protein ligase MEX3C-like [Jatropha curcas]
18 Hb_011145_020 0.1418195756 - - PREDICTED: metalloendoproteinase 1-like [Pyrus x bretschneideri]
19 Hb_116469_010 0.1428116337 - - PREDICTED: uncharacterized protein LOC105647834 [Jatropha curcas]
20 Hb_000005_350 0.1484277531 - - PREDICTED: uncharacterized protein LOC105634263 [Jatropha curcas]

Gene co-expression network

sample Hb_000075_030 Hb_000075_030 Hb_001005_210 Hb_001005_210 Hb_000075_030--Hb_001005_210 Hb_032631_080 Hb_032631_080 Hb_000075_030--Hb_032631_080 Hb_001691_060 Hb_001691_060 Hb_000075_030--Hb_001691_060 Hb_002218_040 Hb_002218_040 Hb_000075_030--Hb_002218_040 Hb_000917_330 Hb_000917_330 Hb_000075_030--Hb_000917_330 Hb_001922_010 Hb_001922_010 Hb_000075_030--Hb_001922_010 Hb_001005_210--Hb_032631_080 Hb_001004_130 Hb_001004_130 Hb_001005_210--Hb_001004_130 Hb_000484_040 Hb_000484_040 Hb_001005_210--Hb_000484_040 Hb_000844_090 Hb_000844_090 Hb_001005_210--Hb_000844_090 Hb_001005_210--Hb_001691_060 Hb_032631_080--Hb_001922_010 Hb_032631_080--Hb_001691_060 Hb_109673_010 Hb_109673_010 Hb_032631_080--Hb_109673_010 Hb_004881_080 Hb_004881_080 Hb_032631_080--Hb_004881_080 Hb_011145_020 Hb_011145_020 Hb_001691_060--Hb_011145_020 Hb_000005_350 Hb_000005_350 Hb_001691_060--Hb_000005_350 Hb_001691_060--Hb_000917_330 Hb_001691_060--Hb_001922_010 Hb_000589_100 Hb_000589_100 Hb_001691_060--Hb_000589_100 Hb_002218_040--Hb_004881_080 Hb_002248_020 Hb_002248_020 Hb_002218_040--Hb_002248_020 Hb_002218_040--Hb_001005_210 Hb_002218_040--Hb_032631_080 Hb_000061_360 Hb_000061_360 Hb_002218_040--Hb_000061_360 Hb_000625_130 Hb_000625_130 Hb_000917_330--Hb_000625_130 Hb_001936_030 Hb_001936_030 Hb_000917_330--Hb_001936_030 Hb_003166_020 Hb_003166_020 Hb_000917_330--Hb_003166_020 Hb_025469_040 Hb_025469_040 Hb_000917_330--Hb_025469_040 Hb_001545_270 Hb_001545_270 Hb_001922_010--Hb_001545_270 Hb_008418_010 Hb_008418_010 Hb_001922_010--Hb_008418_010 Hb_000723_240 Hb_000723_240 Hb_001922_010--Hb_000723_240 Hb_001922_010--Hb_011145_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0170363 0.186325 0.0983956 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.709906 0.0756794

CAGE analysis