Hb_000076_050

Information

Type -
Description -
Location Contig76: 37634-42506
Sequence    

Annotation

kegg
ID vvi:104878039
description uncharacterized LOC104878039
nr
ID XP_011070202.1
description PREDICTED: uncharacterized protein LOC105155919 [Sesamum indicum]
swissprot
ID -
description -
trembl
ID B8BLB5
description Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36669 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000076_050 0.0 - - PREDICTED: uncharacterized protein LOC105155919 [Sesamum indicum]
2 Hb_041813_010 0.191633771 - - conserved hypothetical protein [Ricinus communis]
3 Hb_007520_070 0.2187900182 - - PREDICTED: uncharacterized protein LOC105155919 [Sesamum indicum]
4 Hb_003327_020 0.2486510256 - - PREDICTED: phytosulfokine receptor 2-like, partial [Jatropha curcas]
5 Hb_000856_320 0.2532088901 - - PREDICTED: mitochondrial outer membrane protein porin of 36 kDa-like [Jatropha curcas]
6 Hb_000958_100 0.2557825316 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
7 Hb_012305_110 0.2579372044 - - PREDICTED: uncharacterized protein LOC105156417 [Sesamum indicum]
8 Hb_000473_160 0.2614426845 - - PREDICTED: uncharacterized protein LOC102596609 [Solanum tuberosum]
9 Hb_065525_070 0.2622136095 - - unnamed protein product [Homo sapiens]
10 Hb_000529_140 0.2629044747 - - conserved hypothetical protein [Ricinus communis]
11 Hb_006569_050 0.2650707886 - - -
12 Hb_027010_030 0.2714279317 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
13 Hb_006405_040 0.2715630698 - - hypothetical protein VITISV_026680 [Vitis vinifera]
14 Hb_080761_010 0.2726029165 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
15 Hb_000574_330 0.2769559265 - - PREDICTED: clustered mitochondria protein homolog [Jatropha curcas]
16 Hb_053998_020 0.2812012254 - - -
17 Hb_014548_030 0.2820452771 - - PREDICTED: uncharacterized protein LOC104897580 [Beta vulgaris subsp. vulgaris]
18 Hb_005523_010 0.283346476 transcription factor TF Family: PHD PREDICTED: helicase protein MOM1-like [Jatropha curcas]
19 Hb_000404_040 0.2844052182 - - conserved hypothetical protein [Ricinus communis]
20 Hb_102602_020 0.2848530709 - - hypothetical protein B456_001G166300 [Gossypium raimondii]

Gene co-expression network

sample Hb_000076_050 Hb_000076_050 Hb_041813_010 Hb_041813_010 Hb_000076_050--Hb_041813_010 Hb_007520_070 Hb_007520_070 Hb_000076_050--Hb_007520_070 Hb_003327_020 Hb_003327_020 Hb_000076_050--Hb_003327_020 Hb_000856_320 Hb_000856_320 Hb_000076_050--Hb_000856_320 Hb_000958_100 Hb_000958_100 Hb_000076_050--Hb_000958_100 Hb_012305_110 Hb_012305_110 Hb_000076_050--Hb_012305_110 Hb_041813_050 Hb_041813_050 Hb_041813_010--Hb_041813_050 Hb_102602_020 Hb_102602_020 Hb_041813_010--Hb_102602_020 Hb_041813_010--Hb_007520_070 Hb_000454_160 Hb_000454_160 Hb_041813_010--Hb_000454_160 Hb_027010_030 Hb_027010_030 Hb_041813_010--Hb_027010_030 Hb_062317_020 Hb_062317_020 Hb_007520_070--Hb_062317_020 Hb_000968_070 Hb_000968_070 Hb_007520_070--Hb_000968_070 Hb_001320_020 Hb_001320_020 Hb_007520_070--Hb_001320_020 Hb_007520_070--Hb_102602_020 Hb_065525_070 Hb_065525_070 Hb_003327_020--Hb_065525_070 Hb_113673_010 Hb_113673_010 Hb_003327_020--Hb_113673_010 Hb_052548_010 Hb_052548_010 Hb_003327_020--Hb_052548_010 Hb_005466_010 Hb_005466_010 Hb_003327_020--Hb_005466_010 Hb_000084_140 Hb_000084_140 Hb_003327_020--Hb_000084_140 Hb_023771_020 Hb_023771_020 Hb_003327_020--Hb_023771_020 Hb_141990_020 Hb_141990_020 Hb_000856_320--Hb_141990_020 Hb_000856_320--Hb_000958_100 Hb_017098_060 Hb_017098_060 Hb_000856_320--Hb_017098_060 Hb_002188_030 Hb_002188_030 Hb_000856_320--Hb_002188_030 Hb_000856_320--Hb_005466_010 Hb_003494_130 Hb_003494_130 Hb_000856_320--Hb_003494_130 Hb_021079_020 Hb_021079_020 Hb_000958_100--Hb_021079_020 Hb_007317_130 Hb_007317_130 Hb_000958_100--Hb_007317_130 Hb_015778_060 Hb_015778_060 Hb_000958_100--Hb_015778_060 Hb_000212_370 Hb_000212_370 Hb_000958_100--Hb_000212_370 Hb_004162_190 Hb_004162_190 Hb_000958_100--Hb_004162_190 Hb_002078_270 Hb_002078_270 Hb_000958_100--Hb_002078_270 Hb_102602_030 Hb_102602_030 Hb_012305_110--Hb_102602_030 Hb_100288_010 Hb_100288_010 Hb_012305_110--Hb_100288_010 Hb_171685_040 Hb_171685_040 Hb_012305_110--Hb_171685_040 Hb_005656_150 Hb_005656_150 Hb_012305_110--Hb_005656_150 Hb_102602_010 Hb_102602_010 Hb_012305_110--Hb_102602_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0912 0.0124042 0.0500792 0.0322516 0.031828
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0557017 0.0238995 0.247935

CAGE analysis