Hb_000076_210

Information

Type -
Description -
Location Contig76: 151100-155748
Sequence    

Annotation

kegg
ID rcu:RCOM_0185020
description electron transport oxidoreductase, putative
nr
ID XP_012070757.1
description PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial-like [Jatropha curcas]
swissprot
ID Q9C6I6
description Electron transfer flavoprotein subunit alpha, mitochondrial OS=Arabidopsis thaliana GN=ETFA PE=1 SV=1
trembl
ID A0A067KVP8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00830 PE=4 SV=1
Gene Ontology
ID GO:0005507
description electron transfer flavoprotein subunit mitochondrial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000076_210 0.0 - - PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial-like [Jatropha curcas]
2 Hb_008304_020 0.0770527743 - - PREDICTED: ATP-dependent RNA helicase DBP2-like [Jatropha curcas]
3 Hb_000742_010 0.0885720087 - - PREDICTED: ferredoxin--NADP reductase, root-type isozyme, chloroplastic isoform X2 [Jatropha curcas]
4 Hb_001300_280 0.0899591799 - - PREDICTED: mitochondrial substrate carrier family protein ucpB [Jatropha curcas]
5 Hb_172979_010 0.0916957855 - - PREDICTED: protein disulfide-isomerase SCO2 [Jatropha curcas]
6 Hb_001635_110 0.0937901228 - - PREDICTED: NADP-specific glutamate dehydrogenase [Jatropha curcas]
7 Hb_000120_890 0.0962203806 - - PREDICTED: phosphoinositide phosphatase SAC6 [Jatropha curcas]
8 Hb_006637_030 0.0963686034 - - hypothetical protein CISIN_1g017413mg [Citrus sinensis]
9 Hb_007257_060 0.0981513143 - - PREDICTED: omega-amidase,chloroplastic [Jatropha curcas]
10 Hb_005946_150 0.0981928927 - - PREDICTED: DNA mismatch repair protein MSH7 [Jatropha curcas]
11 Hb_000510_340 0.0982545777 transcription factor TF Family: bZIP PREDICTED: light-inducible protein CPRF2 [Jatropha curcas]
12 Hb_000330_090 0.0992953355 - - ornithine carbamoyltransferase, putative [Ricinus communis]
13 Hb_006824_010 0.1022430748 - - PREDICTED: origin of replication complex subunit 4 [Jatropha curcas]
14 Hb_178968_060 0.1034369275 - - PREDICTED: ubiquitin receptor RAD23b-like [Gossypium raimondii]
15 Hb_002203_030 0.103719559 transcription factor TF Family: NF-YB PREDICTED: protein Dr1 homolog isoform X2 [Jatropha curcas]
16 Hb_000174_260 0.1040218975 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent) [Jatropha curcas]
17 Hb_006189_020 0.1042878815 - - PREDICTED: mitogen-activated protein kinase kinase kinase YODA [Jatropha curcas]
18 Hb_000476_060 0.1068387259 - - Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 [Theobroma cacao]
19 Hb_010863_050 0.1070724758 - - OTU domain-containing protein 6B, putative [Ricinus communis]
20 Hb_001269_130 0.107259296 - - plant poly(A)+ RNA export protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000076_210 Hb_000076_210 Hb_008304_020 Hb_008304_020 Hb_000076_210--Hb_008304_020 Hb_000742_010 Hb_000742_010 Hb_000076_210--Hb_000742_010 Hb_001300_280 Hb_001300_280 Hb_000076_210--Hb_001300_280 Hb_172979_010 Hb_172979_010 Hb_000076_210--Hb_172979_010 Hb_001635_110 Hb_001635_110 Hb_000076_210--Hb_001635_110 Hb_000120_890 Hb_000120_890 Hb_000076_210--Hb_000120_890 Hb_008304_020--Hb_001635_110 Hb_006189_020 Hb_006189_020 Hb_008304_020--Hb_006189_020 Hb_003098_070 Hb_003098_070 Hb_008304_020--Hb_003098_070 Hb_007483_070 Hb_007483_070 Hb_008304_020--Hb_007483_070 Hb_001504_010 Hb_001504_010 Hb_008304_020--Hb_001504_010 Hb_159809_070 Hb_159809_070 Hb_008304_020--Hb_159809_070 Hb_000174_260 Hb_000174_260 Hb_000742_010--Hb_000174_260 Hb_001633_090 Hb_001633_090 Hb_000742_010--Hb_001633_090 Hb_000913_030 Hb_000913_030 Hb_000742_010--Hb_000913_030 Hb_006824_010 Hb_006824_010 Hb_000742_010--Hb_006824_010 Hb_005754_040 Hb_005754_040 Hb_000742_010--Hb_005754_040 Hb_001300_280--Hb_001635_110 Hb_178968_060 Hb_178968_060 Hb_001300_280--Hb_178968_060 Hb_000173_190 Hb_000173_190 Hb_001300_280--Hb_000173_190 Hb_003636_080 Hb_003636_080 Hb_001300_280--Hb_003636_080 Hb_006588_060 Hb_006588_060 Hb_001300_280--Hb_006588_060 Hb_012092_050 Hb_012092_050 Hb_001300_280--Hb_012092_050 Hb_012633_050 Hb_012633_050 Hb_172979_010--Hb_012633_050 Hb_017193_010 Hb_017193_010 Hb_172979_010--Hb_017193_010 Hb_003687_120 Hb_003687_120 Hb_172979_010--Hb_003687_120 Hb_172979_010--Hb_000120_890 Hb_000160_140 Hb_000160_140 Hb_172979_010--Hb_000160_140 Hb_001635_110--Hb_178968_060 Hb_001635_110--Hb_000173_190 Hb_001635_110--Hb_006189_020 Hb_001635_110--Hb_003098_070 Hb_003498_100 Hb_003498_100 Hb_000120_890--Hb_003498_100 Hb_000476_060 Hb_000476_060 Hb_000120_890--Hb_000476_060 Hb_000120_890--Hb_001504_010 Hb_000120_890--Hb_178968_060 Hb_000120_890--Hb_008304_020 Hb_018790_020 Hb_018790_020 Hb_000120_890--Hb_018790_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.54536 2.73516 5.44452 3.25031 1.63209 0.838647
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.90413 2.4972 2.09064 4.1396 3.49105

CAGE analysis