Hb_000077_230

Information

Type -
Description -
Location Contig77: 203714-206892
Sequence    

Annotation

kegg
ID rcu:RCOM_1175380
description hypothetical protein
nr
ID XP_012088298.1
description PREDICTED: uncharacterized protein LOC105646947 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JMV2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25800 PE=4 SV=1
Gene Ontology
ID GO:0016746
description PREDICTED: uncharacterized protein LOC105646947

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57596: 203609-206836
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000077_230 0.0 - - PREDICTED: uncharacterized protein LOC105646947 [Jatropha curcas]
2 Hb_000062_250 0.0647436938 - - PREDICTED: F-box protein SKIP14 [Jatropha curcas]
3 Hb_000077_070 0.0687689591 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 isoform X1 [Jatropha curcas]
4 Hb_000025_360 0.0700681065 - - PREDICTED: protein SMG7 isoform X1 [Jatropha curcas]
5 Hb_000107_500 0.0723779561 - - PREDICTED: protein FAR1-RELATED SEQUENCE 9 [Jatropha curcas]
6 Hb_000031_050 0.0726696669 - - PREDICTED: uncharacterized protein LOC105637478 [Jatropha curcas]
7 Hb_000174_220 0.0770550809 - - cohesin subunit rad21, putative [Ricinus communis]
8 Hb_003609_030 0.0782581483 - - PREDICTED: autophagy-related protein 18f [Jatropha curcas]
9 Hb_005532_050 0.0818364459 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
10 Hb_015807_070 0.0842542813 - - PREDICTED: autophagy-related protein 18f [Jatropha curcas]
11 Hb_001247_070 0.086611613 - - PREDICTED: pentatricopeptide repeat-containing protein At1g56690, mitochondrial [Jatropha curcas]
12 Hb_004204_080 0.0868002282 - - diacylglycerol kinase, theta, putative [Ricinus communis]
13 Hb_006831_110 0.0869326218 - - PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like [Jatropha curcas]
14 Hb_000502_050 0.0876373003 transcription factor TF Family: HSF Heat shock factor protein HSF8, putative [Ricinus communis]
15 Hb_001728_100 0.0881379075 - - hypothetical protein JCGZ_03429 [Jatropha curcas]
16 Hb_000320_380 0.0883867065 - - PREDICTED: uncharacterized protein LOC105649330 isoform X2 [Jatropha curcas]
17 Hb_045793_010 0.0886874866 - - PREDICTED: putative disease resistance protein RGA3 [Pyrus x bretschneideri]
18 Hb_000139_090 0.0891654258 - - PREDICTED: protein TIME FOR COFFEE isoform X3 [Jatropha curcas]
19 Hb_001541_020 0.0896694036 - - PREDICTED: uncharacterized protein At3g49055 [Jatropha curcas]
20 Hb_183963_030 0.0897152892 - - DNA binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000077_230 Hb_000077_230 Hb_000062_250 Hb_000062_250 Hb_000077_230--Hb_000062_250 Hb_000077_070 Hb_000077_070 Hb_000077_230--Hb_000077_070 Hb_000025_360 Hb_000025_360 Hb_000077_230--Hb_000025_360 Hb_000107_500 Hb_000107_500 Hb_000077_230--Hb_000107_500 Hb_000031_050 Hb_000031_050 Hb_000077_230--Hb_000031_050 Hb_000174_220 Hb_000174_220 Hb_000077_230--Hb_000174_220 Hb_001584_150 Hb_001584_150 Hb_000062_250--Hb_001584_150 Hb_015807_070 Hb_015807_070 Hb_000062_250--Hb_015807_070 Hb_000000_370 Hb_000000_370 Hb_000062_250--Hb_000000_370 Hb_007757_110 Hb_007757_110 Hb_000062_250--Hb_007757_110 Hb_000062_250--Hb_000077_070 Hb_000077_070--Hb_000025_360 Hb_000336_140 Hb_000336_140 Hb_000077_070--Hb_000336_140 Hb_000032_320 Hb_000032_320 Hb_000077_070--Hb_000032_320 Hb_001247_070 Hb_001247_070 Hb_000077_070--Hb_001247_070 Hb_001728_100 Hb_001728_100 Hb_000077_070--Hb_001728_100 Hb_045793_010 Hb_045793_010 Hb_000025_360--Hb_045793_010 Hb_002188_110 Hb_002188_110 Hb_000025_360--Hb_002188_110 Hb_000046_010 Hb_000046_010 Hb_000025_360--Hb_000046_010 Hb_001718_090 Hb_001718_090 Hb_000025_360--Hb_001718_090 Hb_183963_030 Hb_183963_030 Hb_000025_360--Hb_183963_030 Hb_000025_360--Hb_000107_500 Hb_000283_070 Hb_000283_070 Hb_000107_500--Hb_000283_070 Hb_001541_020 Hb_001541_020 Hb_000107_500--Hb_001541_020 Hb_006831_110 Hb_006831_110 Hb_000107_500--Hb_006831_110 Hb_000002_040 Hb_000002_040 Hb_000107_500--Hb_000002_040 Hb_000510_310 Hb_000510_310 Hb_000107_500--Hb_000510_310 Hb_006573_200 Hb_006573_200 Hb_000031_050--Hb_006573_200 Hb_006649_060 Hb_006649_060 Hb_000031_050--Hb_006649_060 Hb_004204_080 Hb_004204_080 Hb_000031_050--Hb_004204_080 Hb_000031_050--Hb_007757_110 Hb_124315_020 Hb_124315_020 Hb_000031_050--Hb_124315_020 Hb_000139_090 Hb_000139_090 Hb_000174_220--Hb_000139_090 Hb_000174_220--Hb_015807_070 Hb_002235_300 Hb_002235_300 Hb_000174_220--Hb_002235_300 Hb_000174_220--Hb_045793_010 Hb_003785_040 Hb_003785_040 Hb_000174_220--Hb_003785_040 Hb_000174_220--Hb_001247_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
32.8593 32.7526 13.3349 12.6558 28.1525 34.9869
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.6302 14.365 28.5373 11.202 11.9074

CAGE analysis