Hb_000080_150

Information

Type -
Description -
Location Contig80: 109608-115522
Sequence    

Annotation

kegg
ID tcc:TCM_019946
description Uncharacterized protein isoform 1
nr
ID XP_012065233.1
description PREDICTED: uncharacterized GPI-anchored protein At1g61900 isoform X2 [Jatropha curcas]
swissprot
ID Q8GUI4
description Uncharacterized GPI-anchored protein At1g61900 OS=Arabidopsis thaliana GN=At1g61900 PE=1 SV=1
trembl
ID A0A067L616
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20921 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58736: 109681-115649 , PASA_asmbl_58737: 113870-114107
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000080_150 0.0 - - PREDICTED: uncharacterized GPI-anchored protein At1g61900 isoform X2 [Jatropha curcas]
2 Hb_001377_270 0.0592483655 - - hypothetical protein CICLE_v10021159mg [Citrus clementina]
3 Hb_000366_120 0.0679779117 - - PREDICTED: chaperone protein dnaJ 49-like [Jatropha curcas]
4 Hb_002111_070 0.069288436 - - PREDICTED: protein S-acyltransferase 24 [Jatropha curcas]
5 Hb_003640_040 0.069976736 - - PREDICTED: uncharacterized protein LOC105647348 [Jatropha curcas]
6 Hb_004195_200 0.0743527655 - - glycosyl transferase family 1 family protein [Populus trichocarpa]
7 Hb_001248_060 0.0753845537 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000060_090 0.0805135232 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor A-4a [Jatropha curcas]
9 Hb_012022_090 0.0817867448 - - PREDICTED: LIMR family protein At5g01460 [Gossypium raimondii]
10 Hb_000213_010 0.0821044353 - - PREDICTED: villin-3-like isoform X1 [Populus euphratica]
11 Hb_000347_180 0.0830910727 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
12 Hb_015934_040 0.083909518 - - PREDICTED: protein Hook homolog 3-like [Jatropha curcas]
13 Hb_000070_080 0.0839153642 - - PREDICTED: uncharacterized protein LOC105645742 isoform X2 [Jatropha curcas]
14 Hb_000890_210 0.0839700468 - - PREDICTED: serine/threonine-protein kinase PBS1 isoform X1 [Eucalyptus grandis]
15 Hb_001213_050 0.084060645 - - PREDICTED: uncharacterized protein LOC105646665 isoform X1 [Jatropha curcas]
16 Hb_013399_100 0.0841295023 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001408_040 0.0841919606 - - PREDICTED: MACPF domain-containing protein At4g24290 isoform X2 [Jatropha curcas]
18 Hb_000680_090 0.0844402161 - - Protein SEY1, putative [Ricinus communis]
19 Hb_010618_010 0.0847154095 - - PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 [Jatropha curcas]
20 Hb_000780_230 0.0854545407 transcription factor TF Family: WRKY WRKY protein [Hevea brasiliensis]

Gene co-expression network

sample Hb_000080_150 Hb_000080_150 Hb_001377_270 Hb_001377_270 Hb_000080_150--Hb_001377_270 Hb_000366_120 Hb_000366_120 Hb_000080_150--Hb_000366_120 Hb_002111_070 Hb_002111_070 Hb_000080_150--Hb_002111_070 Hb_003640_040 Hb_003640_040 Hb_000080_150--Hb_003640_040 Hb_004195_200 Hb_004195_200 Hb_000080_150--Hb_004195_200 Hb_001248_060 Hb_001248_060 Hb_000080_150--Hb_001248_060 Hb_005269_040 Hb_005269_040 Hb_001377_270--Hb_005269_040 Hb_001538_130 Hb_001538_130 Hb_001377_270--Hb_001538_130 Hb_000347_180 Hb_000347_180 Hb_001377_270--Hb_000347_180 Hb_000608_320 Hb_000608_320 Hb_001377_270--Hb_000608_320 Hb_001377_270--Hb_000366_120 Hb_007576_110 Hb_007576_110 Hb_000366_120--Hb_007576_110 Hb_021409_040 Hb_021409_040 Hb_000366_120--Hb_021409_040 Hb_000366_120--Hb_004195_200 Hb_014497_050 Hb_014497_050 Hb_000366_120--Hb_014497_050 Hb_001409_020 Hb_001409_020 Hb_000366_120--Hb_001409_020 Hb_000789_310 Hb_000789_310 Hb_000366_120--Hb_000789_310 Hb_000703_150 Hb_000703_150 Hb_002111_070--Hb_000703_150 Hb_002043_140 Hb_002043_140 Hb_002111_070--Hb_002043_140 Hb_009615_170 Hb_009615_170 Hb_002111_070--Hb_009615_170 Hb_000941_130 Hb_000941_130 Hb_002111_070--Hb_000941_130 Hb_000890_210 Hb_000890_210 Hb_002111_070--Hb_000890_210 Hb_020831_030 Hb_020831_030 Hb_003640_040--Hb_020831_030 Hb_002056_090 Hb_002056_090 Hb_003640_040--Hb_002056_090 Hb_001195_530 Hb_001195_530 Hb_003640_040--Hb_001195_530 Hb_003640_040--Hb_004195_200 Hb_000680_090 Hb_000680_090 Hb_003640_040--Hb_000680_090 Hb_000070_080 Hb_000070_080 Hb_003640_040--Hb_000070_080 Hb_002375_010 Hb_002375_010 Hb_004195_200--Hb_002375_010 Hb_001104_160 Hb_001104_160 Hb_004195_200--Hb_001104_160 Hb_004195_200--Hb_007576_110 Hb_004195_200--Hb_020831_030 Hb_010618_010 Hb_010618_010 Hb_001248_060--Hb_010618_010 Hb_001248_060--Hb_001409_020 Hb_011995_010 Hb_011995_010 Hb_001248_060--Hb_011995_010 Hb_000289_060 Hb_000289_060 Hb_001248_060--Hb_000289_060 Hb_015934_040 Hb_015934_040 Hb_001248_060--Hb_015934_040 Hb_001408_040 Hb_001408_040 Hb_001248_060--Hb_001408_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
27.5201 34.1785 14.4348 32.0903 31.1995 33.6338
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.2699 23.8696 31.8869 23.4036 15.8227

CAGE analysis