Hb_000085_090

Information

Type -
Description -
Location Contig85: 68026-72091
Sequence    

Annotation

kegg
ID rcu:RCOM_0546860
description Protein regulator of cytokinesis, putative
nr
ID KDP39198.1
description hypothetical protein JCGZ_00955 [Jatropha curcas]
swissprot
ID Q9FLP0
description 65-kDa microtubule-associated protein 1 OS=Arabidopsis thaliana GN=MAP65-1 PE=1 SV=1
trembl
ID A0A067KW72
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00955 PE=4 SV=1
Gene Ontology
ID GO:0008017
description microtubule-associated proteins 65-1 isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60332: 66849-71912
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000085_090 0.0 - - hypothetical protein JCGZ_00955 [Jatropha curcas]
2 Hb_001492_010 0.1355771598 - - PREDICTED: diacylglycerol kinase 3-like isoform X2 [Populus euphratica]
3 Hb_003050_370 0.1359772645 - - mitochondrial inner membrane protease subunit, putative [Ricinus communis]
4 Hb_000703_210 0.1383243662 - - Inactive protein kinase [Gossypium arboreum]
5 Hb_011206_010 0.1386138415 - - PREDICTED: something about silencing protein 10 isoform X2 [Vitis vinifera]
6 Hb_000959_250 0.1445692115 - - PREDICTED: ribonucleoside-diphosphate reductase large subunit [Jatropha curcas]
7 Hb_000213_070 0.1463615473 transcription factor TF Family: ERF PREDICTED: AP2-like ethylene-responsive transcription factor At2g41710 isoform X2 [Jatropha curcas]
8 Hb_001731_020 0.1490285614 - - PREDICTED: T-complex protein 1 subunit gamma-like [Jatropha curcas]
9 Hb_000021_020 0.1500598843 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Malus domestica]
10 Hb_000027_030 0.1516120215 - - Uncharacterized protein isoform 1 [Theobroma cacao]
11 Hb_000215_190 0.153341662 - - PREDICTED: glucan endo-1,3-beta-glucosidase 13-like [Jatropha curcas]
12 Hb_002675_060 0.1534349652 - - PREDICTED: uncharacterized protein LOC105634954 isoform X2 [Jatropha curcas]
13 Hb_000009_480 0.1534703221 - - PREDICTED: BTB/POZ domain-containing protein At5g66560 [Jatropha curcas]
14 Hb_019053_020 0.1536590978 - - hypothetical protein MIMGU_mgv1a0105441mg, partial [Erythranthe guttata]
15 Hb_006478_060 0.1553010252 - - PREDICTED: homocysteine S-methyltransferase 2 isoform X1 [Jatropha curcas]
16 Hb_001541_080 0.1565513635 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001489_070 0.1573756378 - - PREDICTED: uncharacterized protein LOC105649777 [Jatropha curcas]
18 Hb_000868_060 0.1575447979 - - PREDICTED: conserved oligomeric Golgi complex subunit 3 [Jatropha curcas]
19 Hb_001675_070 0.1579610778 - - eukaryotic translation elongation factor, putative [Ricinus communis]
20 Hb_002888_070 0.1586450601 - - PREDICTED: tubulin-folding cofactor E isoform X1 [Pyrus x bretschneideri]

Gene co-expression network

sample Hb_000085_090 Hb_000085_090 Hb_001492_010 Hb_001492_010 Hb_000085_090--Hb_001492_010 Hb_003050_370 Hb_003050_370 Hb_000085_090--Hb_003050_370 Hb_000703_210 Hb_000703_210 Hb_000085_090--Hb_000703_210 Hb_011206_010 Hb_011206_010 Hb_000085_090--Hb_011206_010 Hb_000959_250 Hb_000959_250 Hb_000085_090--Hb_000959_250 Hb_000213_070 Hb_000213_070 Hb_000085_090--Hb_000213_070 Hb_001454_320 Hb_001454_320 Hb_001492_010--Hb_001454_320 Hb_000215_190 Hb_000215_190 Hb_001492_010--Hb_000215_190 Hb_000120_620 Hb_000120_620 Hb_001492_010--Hb_000120_620 Hb_000331_160 Hb_000331_160 Hb_001492_010--Hb_000331_160 Hb_000160_290 Hb_000160_290 Hb_001492_010--Hb_000160_290 Hb_003124_130 Hb_003124_130 Hb_001492_010--Hb_003124_130 Hb_001085_320 Hb_001085_320 Hb_003050_370--Hb_001085_320 Hb_073973_160 Hb_073973_160 Hb_003050_370--Hb_073973_160 Hb_000868_060 Hb_000868_060 Hb_003050_370--Hb_000868_060 Hb_000785_030 Hb_000785_030 Hb_003050_370--Hb_000785_030 Hb_001894_030 Hb_001894_030 Hb_003050_370--Hb_001894_030 Hb_003050_370--Hb_000959_250 Hb_000703_210--Hb_001492_010 Hb_001369_350 Hb_001369_350 Hb_000703_210--Hb_001369_350 Hb_000703_210--Hb_003050_370 Hb_006478_060 Hb_006478_060 Hb_000703_210--Hb_006478_060 Hb_000703_210--Hb_001085_320 Hb_002374_320 Hb_002374_320 Hb_000703_210--Hb_002374_320 Hb_002815_060 Hb_002815_060 Hb_011206_010--Hb_002815_060 Hb_001731_020 Hb_001731_020 Hb_011206_010--Hb_001731_020 Hb_011206_010--Hb_000213_070 Hb_171788_010 Hb_171788_010 Hb_011206_010--Hb_171788_010 Hb_019053_020 Hb_019053_020 Hb_011206_010--Hb_019053_020 Hb_003897_040 Hb_003897_040 Hb_000959_250--Hb_003897_040 Hb_000648_100 Hb_000648_100 Hb_000959_250--Hb_000648_100 Hb_000959_250--Hb_000868_060 Hb_001832_130 Hb_001832_130 Hb_000959_250--Hb_001832_130 Hb_002398_030 Hb_002398_030 Hb_000959_250--Hb_002398_030 Hb_001278_060 Hb_001278_060 Hb_000213_070--Hb_001278_060 Hb_006002_030 Hb_006002_030 Hb_000213_070--Hb_006002_030 Hb_000331_190 Hb_000331_190 Hb_000213_070--Hb_000331_190 Hb_002675_060 Hb_002675_060 Hb_000213_070--Hb_002675_060 Hb_007668_020 Hb_007668_020 Hb_000213_070--Hb_007668_020 Hb_078477_040 Hb_078477_040 Hb_000213_070--Hb_078477_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
26.3078 14.2145 15.7302 20.895 37.0135 40.7414
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.6373 2.13874 8.31349 28.5947 2.21609

CAGE analysis