Hb_000085_120

Information

Type -
Description -
Location Contig85: 81670-85337
Sequence    

Annotation

kegg
ID rcu:RCOM_0546890
description Benzoate carboxyl methyltransferase, putative (EC:2.1.1.141)
nr
ID XP_002531204.1
description Benzoate carboxyl methyltransferase, putative [Ricinus communis]
swissprot
ID Q9FLN8
description Indole-3-acetate O-methyltransferase 1 OS=Arabidopsis thaliana GN=IAMT1 PE=1 SV=1
trembl
ID B9SYY5
description Benzoate carboxyl methyltransferase, putative OS=Ricinus communis GN=RCOM_0546890 PE=4 SV=1
Gene Ontology
ID GO:0008168
description indole-3-acetate o-methyltransferase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000085_120 0.0 - - Benzoate carboxyl methyltransferase, putative [Ricinus communis]
2 Hb_003641_010 0.1556438715 - - Pectinesterase-3 precursor, putative [Ricinus communis]
3 Hb_005183_090 0.1760844314 - - Calcium-binding EF-hand family protein, putative [Theobroma cacao]
4 Hb_015085_010 0.1786331389 - - hypothetical protein POPTR_0018s11360g [Populus trichocarpa]
5 Hb_125152_010 0.1812350946 - - Ankyrin repeat family protein, putative [Theobroma cacao]
6 Hb_000048_120 0.1813181415 - - PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g37970 [Jatropha curcas]
7 Hb_009501_010 0.1828788127 - - Disease resistance protein RPS5, putative [Ricinus communis]
8 Hb_005183_020 0.1837651669 - - hypothetical protein JCGZ_04285 [Jatropha curcas]
9 Hb_000629_140 0.1844013005 - - hypothetical protein SORBIDRAFT_04g013083 [Sorghum bicolor]
10 Hb_001998_160 0.1868521029 - - PREDICTED: origin recognition complex subunit 1-like [Populus euphratica]
11 Hb_005408_110 0.1877696613 - - purine permease, putative [Ricinus communis]
12 Hb_002217_480 0.1914655481 - - PREDICTED: uncharacterized protein LOC105115446 [Populus euphratica]
13 Hb_000318_070 0.1914886777 - - PREDICTED: peroxidase 10-like [Jatropha curcas]
14 Hb_003252_030 0.1917097034 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
15 Hb_170674_020 0.1934087751 - - hypothetical protein JCGZ_23768 [Jatropha curcas]
16 Hb_000733_260 0.1954236811 - - hypothetical protein JCGZ_26934 [Jatropha curcas]
17 Hb_137821_010 0.1954412832 - - hypothetical protein CISIN_1g034189mg [Citrus sinensis]
18 Hb_097783_010 0.1957279368 transcription factor TF Family: RWP-RK transcription factor, putative [Ricinus communis]
19 Hb_013399_040 0.1965883638 - - hypothetical protein JCGZ_24713 [Jatropha curcas]
20 Hb_001584_040 0.1971215201 - - PREDICTED: uncharacterized protein LOC105125166 [Populus euphratica]

Gene co-expression network

sample Hb_000085_120 Hb_000085_120 Hb_003641_010 Hb_003641_010 Hb_000085_120--Hb_003641_010 Hb_005183_090 Hb_005183_090 Hb_000085_120--Hb_005183_090 Hb_015085_010 Hb_015085_010 Hb_000085_120--Hb_015085_010 Hb_125152_010 Hb_125152_010 Hb_000085_120--Hb_125152_010 Hb_000048_120 Hb_000048_120 Hb_000085_120--Hb_000048_120 Hb_009501_010 Hb_009501_010 Hb_000085_120--Hb_009501_010 Hb_005263_010 Hb_005263_010 Hb_003641_010--Hb_005263_010 Hb_000025_220 Hb_000025_220 Hb_003641_010--Hb_000025_220 Hb_097783_010 Hb_097783_010 Hb_003641_010--Hb_097783_010 Hb_005368_030 Hb_005368_030 Hb_003641_010--Hb_005368_030 Hb_000733_260 Hb_000733_260 Hb_003641_010--Hb_000733_260 Hb_003607_040 Hb_003607_040 Hb_005183_090--Hb_003607_040 Hb_103942_020 Hb_103942_020 Hb_005183_090--Hb_103942_020 Hb_029508_050 Hb_029508_050 Hb_005183_090--Hb_029508_050 Hb_007441_320 Hb_007441_320 Hb_005183_090--Hb_007441_320 Hb_006061_020 Hb_006061_020 Hb_005183_090--Hb_006061_020 Hb_001454_030 Hb_001454_030 Hb_005183_090--Hb_001454_030 Hb_041067_010 Hb_041067_010 Hb_015085_010--Hb_041067_010 Hb_103931_010 Hb_103931_010 Hb_015085_010--Hb_103931_010 Hb_001053_100 Hb_001053_100 Hb_015085_010--Hb_001053_100 Hb_032280_010 Hb_032280_010 Hb_015085_010--Hb_032280_010 Hb_000164_250 Hb_000164_250 Hb_015085_010--Hb_000164_250 Hb_003747_080 Hb_003747_080 Hb_015085_010--Hb_003747_080 Hb_125152_010--Hb_000048_120 Hb_000629_140 Hb_000629_140 Hb_125152_010--Hb_000629_140 Hb_125152_010--Hb_009501_010 Hb_001998_160 Hb_001998_160 Hb_125152_010--Hb_001998_160 Hb_002217_480 Hb_002217_480 Hb_125152_010--Hb_002217_480 Hb_137821_010 Hb_137821_010 Hb_125152_010--Hb_137821_010 Hb_000048_120--Hb_000629_140 Hb_000048_120--Hb_009501_010 Hb_000048_120--Hb_001998_160 Hb_000048_120--Hb_137821_010 Hb_000048_120--Hb_002217_480 Hb_009501_010--Hb_001998_160 Hb_000318_070 Hb_000318_070 Hb_009501_010--Hb_000318_070 Hb_170674_020 Hb_170674_020 Hb_009501_010--Hb_170674_020 Hb_009501_010--Hb_002217_480
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0184683 0 0.219309 0 0.0162407
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis