Hb_000086_180

Information

Type -
Description -
Location Contig86: 156445-164406
Sequence    

Annotation

kegg
ID cmo:103501715
description dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2
nr
ID KDP26516.1
description hypothetical protein JCGZ_17674 [Jatropha curcas]
swissprot
ID Q93Z16
description Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Arabidopsis thaliana GN=RPN2 PE=2 SV=1
trembl
ID A0A067JRD4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17674 PE=4 SV=1
Gene Ontology
ID GO:0005739
description dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60714: 156458-164346
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000086_180 0.0 - - hypothetical protein JCGZ_17674 [Jatropha curcas]
2 Hb_000008_390 0.0868492636 - - PREDICTED: protein disulfide isomerase-like 1-4 [Jatropha curcas]
3 Hb_001488_290 0.0996677752 - - Ras-GTPase-activating protein-binding protein, putative [Ricinus communis]
4 Hb_001160_110 0.1056388217 - - PREDICTED: kinesin-related protein 13 [Jatropha curcas]
5 Hb_000032_410 0.1198391768 - - PREDICTED: dynamin-related protein 5A [Jatropha curcas]
6 Hb_001663_130 0.123170452 - - acyl-CoA thioesterase, putative [Ricinus communis]
7 Hb_000649_330 0.1233877404 - - hypothetical protein POPTR_0010s11880g [Populus trichocarpa]
8 Hb_001117_080 0.1250190003 - - PREDICTED: mitogen-activated protein kinase kinase 2 isoform X1 [Jatropha curcas]
9 Hb_050847_040 0.1277645049 - - PREDICTED: uncharacterized protein LOC105649141 [Jatropha curcas]
10 Hb_000968_060 0.1315922197 - - PREDICTED: gamma-interferon-inducible-lysosomal thiol reductase [Jatropha curcas]
11 Hb_000890_020 0.1337074619 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
12 Hb_004545_080 0.1342563656 - - protein with unknown function [Ricinus communis]
13 Hb_001141_050 0.1351221267 transcription factor TF Family: CPP PREDICTED: protein tesmin/TSO1-like CXC 2 isoform X2 [Jatropha curcas]
14 Hb_000808_210 0.1366098927 - - hypothetical protein EUTSA_v10023481mg [Eutrema salsugineum]
15 Hb_002999_030 0.1387375532 - - PREDICTED: beta-1,3-galactosyltransferase 15 [Jatropha curcas]
16 Hb_002876_200 0.139005347 - - PREDICTED: uncharacterized protein LOC105641209 isoform X1 [Jatropha curcas]
17 Hb_000001_090 0.1390969304 - - PREDICTED: uncharacterized protein At3g58460 [Populus euphratica]
18 Hb_001001_090 0.139869325 - - PREDICTED: uncharacterized protein LOC105633658 [Jatropha curcas]
19 Hb_000015_150 0.1411381756 - - Ubiquitin-conjugating enzyme E2 7 family protein [Populus trichocarpa]
20 Hb_074399_010 0.1416260818 - - PREDICTED: phragmoplast orienting kinesin-1 isoform X1 [Populus euphratica]

Gene co-expression network

sample Hb_000086_180 Hb_000086_180 Hb_000008_390 Hb_000008_390 Hb_000086_180--Hb_000008_390 Hb_001488_290 Hb_001488_290 Hb_000086_180--Hb_001488_290 Hb_001160_110 Hb_001160_110 Hb_000086_180--Hb_001160_110 Hb_000032_410 Hb_000032_410 Hb_000086_180--Hb_000032_410 Hb_001663_130 Hb_001663_130 Hb_000086_180--Hb_001663_130 Hb_000649_330 Hb_000649_330 Hb_000086_180--Hb_000649_330 Hb_011609_010 Hb_011609_010 Hb_000008_390--Hb_011609_010 Hb_000803_090 Hb_000803_090 Hb_000008_390--Hb_000803_090 Hb_006935_040 Hb_006935_040 Hb_000008_390--Hb_006935_040 Hb_000959_190 Hb_000959_190 Hb_000008_390--Hb_000959_190 Hb_001021_100 Hb_001021_100 Hb_000008_390--Hb_001021_100 Hb_002876_200 Hb_002876_200 Hb_001488_290--Hb_002876_200 Hb_004586_040 Hb_004586_040 Hb_001488_290--Hb_004586_040 Hb_050847_040 Hb_050847_040 Hb_001488_290--Hb_050847_040 Hb_002999_030 Hb_002999_030 Hb_001488_290--Hb_002999_030 Hb_001141_050 Hb_001141_050 Hb_001488_290--Hb_001141_050 Hb_003687_080 Hb_003687_080 Hb_001160_110--Hb_003687_080 Hb_003160_070 Hb_003160_070 Hb_001160_110--Hb_003160_070 Hb_001160_110--Hb_001663_130 Hb_002026_090 Hb_002026_090 Hb_001160_110--Hb_002026_090 Hb_001160_110--Hb_000032_410 Hb_004158_050 Hb_004158_050 Hb_001160_110--Hb_004158_050 Hb_005357_110 Hb_005357_110 Hb_000032_410--Hb_005357_110 Hb_000915_130 Hb_000915_130 Hb_000032_410--Hb_000915_130 Hb_004545_080 Hb_004545_080 Hb_000032_410--Hb_004545_080 Hb_005511_130 Hb_005511_130 Hb_000032_410--Hb_005511_130 Hb_029253_010 Hb_029253_010 Hb_000032_410--Hb_029253_010 Hb_004730_020 Hb_004730_020 Hb_000032_410--Hb_004730_020 Hb_000300_560 Hb_000300_560 Hb_001663_130--Hb_000300_560 Hb_003894_060 Hb_003894_060 Hb_001663_130--Hb_003894_060 Hb_007594_080 Hb_007594_080 Hb_001663_130--Hb_007594_080 Hb_002447_050 Hb_002447_050 Hb_001663_130--Hb_002447_050 Hb_011188_010 Hb_011188_010 Hb_001663_130--Hb_011188_010 Hb_001001_090 Hb_001001_090 Hb_000649_330--Hb_001001_090 Hb_000015_150 Hb_000015_150 Hb_000649_330--Hb_000015_150 Hb_009078_020 Hb_009078_020 Hb_000649_330--Hb_009078_020 Hb_002849_050 Hb_002849_050 Hb_000649_330--Hb_002849_050 Hb_000649_330--Hb_011188_010 Hb_005214_070 Hb_005214_070 Hb_000649_330--Hb_005214_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.78769 16.005 64.9412 31.3412 12.7649 6.75951
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.11513 2.71439 4.19811 15.871 20.1958

CAGE analysis