Hb_000086_470

Information

Type -
Description -
Location Contig86: 369527-384818
Sequence    

Annotation

kegg
ID rcu:RCOM_0542960
description receptor protein kinase, putative (EC:2.7.11.25 1.3.1.74)
nr
ID KDP26487.1
description hypothetical protein JCGZ_17645 [Jatropha curcas]
swissprot
ID Q9LP24
description Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1
trembl
ID A0A067JRH1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17645 PE=4 SV=1
Gene Ontology
ID GO:0005622
description probable lrr receptor-like serine threonine-protein kinase at4g08850

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60753: 370617-371299 , PASA_asmbl_60754: 373759-376073 , PASA_asmbl_60755: 381442-381902 , PASA_asmbl_60759: 383915-384913
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000086_470 0.0 - - hypothetical protein JCGZ_17645 [Jatropha curcas]
2 Hb_007237_020 0.0630450599 - - PREDICTED: protein trichome birefringence-like 23 [Jatropha curcas]
3 Hb_000120_340 0.0704013781 - - Cucumisin precursor, putative [Ricinus communis]
4 Hb_004202_030 0.0719199355 - - PREDICTED: uncharacterized protein LOC103449702 [Malus domestica]
5 Hb_007313_030 0.0842869216 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 [Jatropha curcas]
6 Hb_007632_160 0.0848211858 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000627_040 0.0851224444 - - leucine-rich repeat protein, putative [Ricinus communis]
8 Hb_019973_010 0.0858864907 - - PREDICTED: probable methyltransferase PMT18 isoform X2 [Jatropha curcas]
9 Hb_121313_010 0.0884547073 - - PREDICTED: endoglucanase 24-like [Jatropha curcas]
10 Hb_002518_040 0.089100106 - - PREDICTED: probable serine/threonine-protein kinase At5g41260 [Jatropha curcas]
11 Hb_001157_050 0.0917916739 - - cation efflux protein/ zinc transporter, putative [Ricinus communis]
12 Hb_003207_120 0.0923118973 - - molybdopterin cofactor sulfurase, putative [Ricinus communis]
13 Hb_002053_180 0.0992507845 - - PREDICTED: probable inactive receptor kinase At2g26730 [Jatropha curcas]
14 Hb_002490_060 0.101002955 - - PREDICTED: uncharacterized protein LOC105638743 [Jatropha curcas]
15 Hb_000996_070 0.1054752127 - - unnamed protein product [Vitis vinifera]
16 Hb_000027_160 0.1072018638 - - PREDICTED: probable protein phosphatase 2C 15 isoform X3 [Jatropha curcas]
17 Hb_001571_080 0.1075528139 - - PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Jatropha curcas]
18 Hb_004115_010 0.109715068 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG11 [Jatropha curcas]
19 Hb_005276_190 0.1099720244 - - PREDICTED: uncharacterized protein LOC105650003 isoform X2 [Jatropha curcas]
20 Hb_002301_400 0.11159629 - - structural constituent of cell wall, putative [Ricinus communis]

Gene co-expression network

sample Hb_000086_470 Hb_000086_470 Hb_007237_020 Hb_007237_020 Hb_000086_470--Hb_007237_020 Hb_000120_340 Hb_000120_340 Hb_000086_470--Hb_000120_340 Hb_004202_030 Hb_004202_030 Hb_000086_470--Hb_004202_030 Hb_007313_030 Hb_007313_030 Hb_000086_470--Hb_007313_030 Hb_007632_160 Hb_007632_160 Hb_000086_470--Hb_007632_160 Hb_000627_040 Hb_000627_040 Hb_000086_470--Hb_000627_040 Hb_007237_020--Hb_000627_040 Hb_002053_180 Hb_002053_180 Hb_007237_020--Hb_002053_180 Hb_002490_060 Hb_002490_060 Hb_007237_020--Hb_002490_060 Hb_002817_030 Hb_002817_030 Hb_007237_020--Hb_002817_030 Hb_007237_020--Hb_000120_340 Hb_003666_070 Hb_003666_070 Hb_000120_340--Hb_003666_070 Hb_019973_010 Hb_019973_010 Hb_000120_340--Hb_019973_010 Hb_000120_340--Hb_007632_160 Hb_011671_050 Hb_011671_050 Hb_000120_340--Hb_011671_050 Hb_003207_120 Hb_003207_120 Hb_004202_030--Hb_003207_120 Hb_006501_080 Hb_006501_080 Hb_004202_030--Hb_006501_080 Hb_029262_010 Hb_029262_010 Hb_004202_030--Hb_029262_010 Hb_004202_030--Hb_019973_010 Hb_004308_030 Hb_004308_030 Hb_004202_030--Hb_004308_030 Hb_002518_040 Hb_002518_040 Hb_007313_030--Hb_002518_040 Hb_108576_020 Hb_108576_020 Hb_007313_030--Hb_108576_020 Hb_003101_020 Hb_003101_020 Hb_007313_030--Hb_003101_020 Hb_001439_050 Hb_001439_050 Hb_007313_030--Hb_001439_050 Hb_062807_010 Hb_062807_010 Hb_007313_030--Hb_062807_010 Hb_001157_050 Hb_001157_050 Hb_007632_160--Hb_001157_050 Hb_000418_110 Hb_000418_110 Hb_007632_160--Hb_000418_110 Hb_004122_010 Hb_004122_010 Hb_007632_160--Hb_004122_010 Hb_005675_050 Hb_005675_050 Hb_007632_160--Hb_005675_050 Hb_000627_040--Hb_002490_060 Hb_121313_010 Hb_121313_010 Hb_000627_040--Hb_121313_010 Hb_005730_110 Hb_005730_110 Hb_000627_040--Hb_005730_110 Hb_000627_040--Hb_002053_180 Hb_006922_020 Hb_006922_020 Hb_000627_040--Hb_006922_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00806576 0.996293 6.82393 4.24243 0 0.0146009
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.00913144 0 0 0.560364 2.45357

CAGE analysis