Hb_000086_730

Information

Type -
Description -
Location Contig86: 671719-672793
Sequence    

Annotation

kegg
ID rcu:RCOM_0822420
description leucoanthocyanidin dioxygenase, putative (EC:1.14.11.19)
nr
ID XP_012069156.1
description PREDICTED: feruloyl CoA ortho-hydroxylase 1-like [Jatropha curcas]
swissprot
ID Q9LHN8
description Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana GN=F6'H1 PE=1 SV=1
trembl
ID A0A067KXI6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24920 PE=3 SV=1
Gene Ontology
ID GO:0046872
description feruloyl ortho-hydroxylase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60792: 671626-672905
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000086_730 0.0 - - PREDICTED: feruloyl CoA ortho-hydroxylase 1-like [Jatropha curcas]
2 Hb_000194_080 0.128589172 - - hypothetical protein JCGZ_18743 [Jatropha curcas]
3 Hb_005000_040 0.1522382334 - - ACC oxidase ACCO2 [Manihot esculenta]
4 Hb_003064_010 0.161095252 - - Senescence-related gene 1 [Theobroma cacao]
5 Hb_080225_010 0.161883259 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
6 Hb_000347_530 0.1660665722 transcription factor TF Family: MYB PREDICTED: transcription factor MYB114-like [Jatropha curcas]
7 Hb_000800_060 0.1667136848 - - hypothetical protein POPTR_0008s02870g [Populus trichocarpa]
8 Hb_090510_010 0.1678586561 - - hypothetical protein JCGZ_21650 [Jatropha curcas]
9 Hb_005396_010 0.1702764138 - - PREDICTED: interleukin enhancer-binding factor 3-B-like [Jatropha curcas]
10 Hb_000917_330 0.1710543005 - - PREDICTED: leucoanthocyanidin reductase-like [Jatropha curcas]
11 Hb_002809_020 0.1712044318 - - PREDICTED: leucoanthocyanidin dioxygenase [Jatropha curcas]
12 Hb_000625_130 0.1714437829 - - PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Jatropha curcas]
13 Hb_001473_100 0.1714927505 - - chalcone synthase 1 [Jatropha curcas]
14 Hb_000815_280 0.1732813461 - - PREDICTED: phosphate transporter PHO1 homolog 3 [Jatropha curcas]
15 Hb_007044_070 0.1748521538 - - PREDICTED: tetraketide alpha-pyrone reductase 1-like [Jatropha curcas]
16 Hb_124625_010 0.1751643145 - - hypothetical protein JCGZ_01142 [Jatropha curcas]
17 Hb_003166_020 0.1792696064 - - PREDICTED: RNA-binding E3 ubiquitin-protein ligase MEX3C-like [Jatropha curcas]
18 Hb_025469_040 0.1794041076 - - PREDICTED: acidic mammalian chitinase-like [Jatropha curcas]
19 Hb_000668_070 0.1794184257 - - conserved hypothetical protein [Ricinus communis]
20 Hb_069151_010 0.1821635295 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Gossypium raimondii]

Gene co-expression network

sample Hb_000086_730 Hb_000086_730 Hb_000194_080 Hb_000194_080 Hb_000086_730--Hb_000194_080 Hb_005000_040 Hb_005000_040 Hb_000086_730--Hb_005000_040 Hb_003064_010 Hb_003064_010 Hb_000086_730--Hb_003064_010 Hb_080225_010 Hb_080225_010 Hb_000086_730--Hb_080225_010 Hb_000347_530 Hb_000347_530 Hb_000086_730--Hb_000347_530 Hb_000800_060 Hb_000800_060 Hb_000086_730--Hb_000800_060 Hb_000194_080--Hb_003064_010 Hb_000029_420 Hb_000029_420 Hb_000194_080--Hb_000029_420 Hb_001473_100 Hb_001473_100 Hb_000194_080--Hb_001473_100 Hb_002809_020 Hb_002809_020 Hb_000194_080--Hb_002809_020 Hb_000815_280 Hb_000815_280 Hb_000194_080--Hb_000815_280 Hb_002057_010 Hb_002057_010 Hb_005000_040--Hb_002057_010 Hb_148435_010 Hb_148435_010 Hb_005000_040--Hb_148435_010 Hb_007044_070 Hb_007044_070 Hb_005000_040--Hb_007044_070 Hb_000748_070 Hb_000748_070 Hb_005000_040--Hb_000748_070 Hb_001936_030 Hb_001936_030 Hb_005000_040--Hb_001936_030 Hb_003064_010--Hb_000029_420 Hb_004021_100 Hb_004021_100 Hb_003064_010--Hb_004021_100 Hb_001623_400 Hb_001623_400 Hb_003064_010--Hb_001623_400 Hb_004055_080 Hb_004055_080 Hb_003064_010--Hb_004055_080 Hb_049677_010 Hb_049677_010 Hb_003064_010--Hb_049677_010 Hb_000256_100 Hb_000256_100 Hb_080225_010--Hb_000256_100 Hb_003057_080 Hb_003057_080 Hb_080225_010--Hb_003057_080 Hb_000347_550 Hb_000347_550 Hb_080225_010--Hb_000347_550 Hb_000614_180 Hb_000614_180 Hb_080225_010--Hb_000614_180 Hb_080225_010--Hb_005000_040 Hb_018591_010 Hb_018591_010 Hb_000347_530--Hb_018591_010 Hb_004544_070 Hb_004544_070 Hb_000347_530--Hb_004544_070 Hb_000934_170 Hb_000934_170 Hb_000347_530--Hb_000934_170 Hb_002301_420 Hb_002301_420 Hb_000347_530--Hb_002301_420 Hb_002749_070 Hb_002749_070 Hb_000347_530--Hb_002749_070 Hb_010407_120 Hb_010407_120 Hb_000347_530--Hb_010407_120 Hb_090510_010 Hb_090510_010 Hb_000800_060--Hb_090510_010 Hb_005396_010 Hb_005396_010 Hb_000800_060--Hb_005396_010 Hb_124625_010 Hb_124625_010 Hb_000800_060--Hb_124625_010 Hb_000668_070 Hb_000668_070 Hb_000800_060--Hb_000668_070 Hb_069151_010 Hb_069151_010 Hb_000800_060--Hb_069151_010 Hb_050898_020 Hb_050898_020 Hb_000800_060--Hb_050898_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0498434 0.254248 0.26168 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0537772 0 1.2847 0

CAGE analysis