Hb_000087_200

Information

Type -
Description -
Location Contig87: 303571-304236
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_012082001.1
description PREDICTED: uncharacterized protein LOC105641954 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JZN5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18258 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61155: 303838-304166
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000087_200 0.0 - - PREDICTED: uncharacterized protein LOC105641954 [Jatropha curcas]
2 Hb_028486_010 0.0485482896 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
3 Hb_004109_240 0.0724317867 - - PREDICTED: putative serine/threonine-protein kinase isoform X1 [Jatropha curcas]
4 Hb_002471_190 0.0934796273 - - PREDICTED: U-box domain-containing protein 21-like [Jatropha curcas]
5 Hb_017693_040 0.0976528059 - - tyrosine kinase family protein [Medicago truncatula]
6 Hb_121540_010 0.0978775906 - - PREDICTED: UDP-glycosyltransferase 88A1-like [Jatropha curcas]
7 Hb_021254_020 0.1125452357 - - calmodulin binding protein, putative [Ricinus communis]
8 Hb_160653_010 0.1184966691 - - PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
9 Hb_001635_230 0.1207287345 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
10 Hb_000836_420 0.1220393788 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
11 Hb_008810_030 0.1251151013 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
12 Hb_001619_140 0.1257546345 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
13 Hb_154466_010 0.1272248411 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
14 Hb_001198_160 0.1274232617 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
15 Hb_004899_360 0.1278959464 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
16 Hb_000836_220 0.1282108791 - - UDP-glucosyltransferase, putative [Ricinus communis]
17 Hb_003060_150 0.1284483272 - - UDP-glucosyltransferase, putative [Ricinus communis]
18 Hb_008202_020 0.1311215368 - - receptor serine/threonine kinase, putative [Ricinus communis]
19 Hb_000359_260 0.1328042671 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
20 Hb_077694_010 0.1362150413 - - uncharacterized protein LOC100305624 [Glycine max]

Gene co-expression network

sample Hb_000087_200 Hb_000087_200 Hb_028486_010 Hb_028486_010 Hb_000087_200--Hb_028486_010 Hb_004109_240 Hb_004109_240 Hb_000087_200--Hb_004109_240 Hb_002471_190 Hb_002471_190 Hb_000087_200--Hb_002471_190 Hb_017693_040 Hb_017693_040 Hb_000087_200--Hb_017693_040 Hb_121540_010 Hb_121540_010 Hb_000087_200--Hb_121540_010 Hb_021254_020 Hb_021254_020 Hb_000087_200--Hb_021254_020 Hb_028486_010--Hb_121540_010 Hb_028486_010--Hb_004109_240 Hb_003060_150 Hb_003060_150 Hb_028486_010--Hb_003060_150 Hb_028486_010--Hb_021254_020 Hb_160653_010 Hb_160653_010 Hb_028486_010--Hb_160653_010 Hb_004109_240--Hb_021254_020 Hb_004899_360 Hb_004899_360 Hb_004109_240--Hb_004899_360 Hb_008202_020 Hb_008202_020 Hb_004109_240--Hb_008202_020 Hb_004109_240--Hb_121540_010 Hb_154466_010 Hb_154466_010 Hb_002471_190--Hb_154466_010 Hb_002010_020 Hb_002010_020 Hb_002471_190--Hb_002010_020 Hb_001635_230 Hb_001635_230 Hb_002471_190--Hb_001635_230 Hb_002471_190--Hb_004109_240 Hb_158111_010 Hb_158111_010 Hb_002471_190--Hb_158111_010 Hb_077694_010 Hb_077694_010 Hb_017693_040--Hb_077694_010 Hb_017693_040--Hb_121540_010 Hb_017693_040--Hb_001635_230 Hb_000359_260 Hb_000359_260 Hb_017693_040--Hb_000359_260 Hb_012022_020 Hb_012022_020 Hb_017693_040--Hb_012022_020 Hb_121540_010--Hb_003060_150 Hb_005381_010 Hb_005381_010 Hb_121540_010--Hb_005381_010 Hb_000069_530 Hb_000069_530 Hb_121540_010--Hb_000069_530 Hb_121540_010--Hb_077694_010 Hb_001660_080 Hb_001660_080 Hb_121540_010--Hb_001660_080 Hb_004393_030 Hb_004393_030 Hb_021254_020--Hb_004393_030 Hb_008810_030 Hb_008810_030 Hb_021254_020--Hb_008810_030 Hb_003078_070 Hb_003078_070 Hb_021254_020--Hb_003078_070 Hb_000985_140 Hb_000985_140 Hb_021254_020--Hb_000985_140 Hb_001660_130 Hb_001660_130 Hb_021254_020--Hb_001660_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.61752 1.28484 0.731401 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.206432 0.161047

CAGE analysis