Hb_000088_160

Information

Type -
Description -
Location Contig88: 205561-205844
Sequence    

Annotation

kegg
ID rcu:RCOM_1334010
description serine-type endopeptidase inhibitor, putative
nr
ID XP_012066804.1
description PREDICTED: uncharacterized protein LOC105629775 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L586
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02450 PE=4 SV=1
Gene Ontology
ID GO:0005576
description serine-type endopeptidase inhibitor

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61385: 205388-205765
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000088_160 0.0 - - PREDICTED: uncharacterized protein LOC105629775 [Jatropha curcas]
2 Hb_000521_300 0.1333204232 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
3 Hb_007618_010 0.1473573593 - - hypothetical protein JCGZ_23475 [Jatropha curcas]
4 Hb_133636_010 0.1738143372 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Brassica rapa]
5 Hb_002783_320 0.1740712578 transcription factor TF Family: E2F-DP PREDICTED: transcription factor E2FC isoform X1 [Jatropha curcas]
6 Hb_001454_340 0.1762751577 - - ATDI21 [Manihot esculenta]
7 Hb_164010_090 0.1823042462 - - cellulose synthase, putative [Ricinus communis]
8 Hb_001489_030 0.1831458258 - - PREDICTED: protein NRT1/ PTR FAMILY 4.6 [Jatropha curcas]
9 Hb_000141_220 0.183601265 - - PREDICTED: 14 kDa proline-rich protein DC2.15-like [Gossypium raimondii]
10 Hb_011970_040 0.1843984548 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001252_040 0.184832082 - - PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
12 Hb_012753_200 0.1858169376 - - hypothetical protein JCGZ_20651 [Jatropha curcas]
13 Hb_000086_370 0.1863161853 - - Long-chain-alcohol oxidase FAO2 [Triticum urartu]
14 Hb_000043_080 0.1873727587 - - lipid binding protein, putative [Ricinus communis]
15 Hb_002805_150 0.1880054533 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
16 Hb_000556_200 0.1882670703 - - PREDICTED: AT-hook motif nuclear-localized protein 22 [Jatropha curcas]
17 Hb_012395_070 0.1885147843 - - PREDICTED: probable metal-nicotianamine transporter YSL6 [Jatropha curcas]
18 Hb_000030_260 0.1888124087 desease resistance Gene Name: NB-ARC leucine-rich repeat containing protein, putative [Ricinus communis]
19 Hb_000792_060 0.1922866546 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001838_010 0.1923506992 - - hypothetical protein POPTR_0005s18380g [Populus trichocarpa]

Gene co-expression network

sample Hb_000088_160 Hb_000088_160 Hb_000521_300 Hb_000521_300 Hb_000088_160--Hb_000521_300 Hb_007618_010 Hb_007618_010 Hb_000088_160--Hb_007618_010 Hb_133636_010 Hb_133636_010 Hb_000088_160--Hb_133636_010 Hb_002783_320 Hb_002783_320 Hb_000088_160--Hb_002783_320 Hb_001454_340 Hb_001454_340 Hb_000088_160--Hb_001454_340 Hb_164010_090 Hb_164010_090 Hb_000088_160--Hb_164010_090 Hb_001252_040 Hb_001252_040 Hb_000521_300--Hb_001252_040 Hb_000086_370 Hb_000086_370 Hb_000521_300--Hb_000086_370 Hb_001373_010 Hb_001373_010 Hb_000521_300--Hb_001373_010 Hb_011214_140 Hb_011214_140 Hb_000521_300--Hb_011214_140 Hb_004195_190 Hb_004195_190 Hb_000521_300--Hb_004195_190 Hb_008175_030 Hb_008175_030 Hb_007618_010--Hb_008175_030 Hb_000532_130 Hb_000532_130 Hb_007618_010--Hb_000532_130 Hb_057079_020 Hb_057079_020 Hb_007618_010--Hb_057079_020 Hb_002739_060 Hb_002739_060 Hb_007618_010--Hb_002739_060 Hb_007253_040 Hb_007253_040 Hb_007618_010--Hb_007253_040 Hb_003299_010 Hb_003299_010 Hb_133636_010--Hb_003299_010 Hb_000844_010 Hb_000844_010 Hb_133636_010--Hb_000844_010 Hb_133636_010--Hb_002783_320 Hb_005157_010 Hb_005157_010 Hb_133636_010--Hb_005157_010 Hb_011909_030 Hb_011909_030 Hb_133636_010--Hb_011909_030 Hb_007773_030 Hb_007773_030 Hb_133636_010--Hb_007773_030 Hb_010578_050 Hb_010578_050 Hb_002783_320--Hb_010578_050 Hb_000030_260 Hb_000030_260 Hb_002783_320--Hb_000030_260 Hb_000676_030 Hb_000676_030 Hb_002783_320--Hb_000676_030 Hb_017866_020 Hb_017866_020 Hb_002783_320--Hb_017866_020 Hb_011970_040 Hb_011970_040 Hb_002783_320--Hb_011970_040 Hb_004195_170 Hb_004195_170 Hb_002783_320--Hb_004195_170 Hb_033006_040 Hb_033006_040 Hb_001454_340--Hb_033006_040 Hb_006711_010 Hb_006711_010 Hb_001454_340--Hb_006711_010 Hb_000380_040 Hb_000380_040 Hb_001454_340--Hb_000380_040 Hb_050484_010 Hb_050484_010 Hb_001454_340--Hb_050484_010 Hb_003119_070 Hb_003119_070 Hb_001454_340--Hb_003119_070 Hb_002007_230 Hb_002007_230 Hb_001454_340--Hb_002007_230 Hb_000141_220 Hb_000141_220 Hb_164010_090--Hb_000141_220 Hb_164010_090--Hb_004195_170 Hb_005380_040 Hb_005380_040 Hb_164010_090--Hb_005380_040 Hb_164010_090--Hb_017866_020 Hb_000589_180 Hb_000589_180 Hb_164010_090--Hb_000589_180 Hb_164010_090--Hb_000844_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.46 297.109 25.8446 45.4937 1.78364 44.2241
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.53373 0 1.33864 314.142 28.7513

CAGE analysis