Hb_000090_020

Information

Type -
Description -
Location Contig90: 31428-32507
Sequence    

Annotation

kegg
ID rcu:RCOM_0834680
description acyltransferase, putative
nr
ID XP_002532421.1
description acyltransferase, putative [Ricinus communis]
swissprot
ID Q9SV07
description Acyl-CoA--sterol O-acyltransferase 1 OS=Arabidopsis thaliana GN=ASAT1 PE=1 SV=1
trembl
ID B9T2F2
description Acyltransferase, putative OS=Ricinus communis GN=RCOM_0834680 PE=4 SV=1
Gene Ontology
ID GO:0047196
description acyl- sterol acyl transferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000090_020 0.0 - - acyltransferase, putative [Ricinus communis]
2 Hb_103541_010 0.0356921944 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X2 [Jatropha curcas]
3 Hb_012553_030 0.082706577 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
4 Hb_002598_020 0.0951015004 - - PREDICTED: sugar transporter ERD6-like 5 [Populus euphratica]
5 Hb_000537_090 0.0978662266 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000732_100 0.10159742 - - PREDICTED: uncharacterized protein LOC105649440 [Jatropha curcas]
7 Hb_001318_230 0.106348195 - - Boron transporter, putative [Ricinus communis]
8 Hb_000468_050 0.1072257626 - - -
9 Hb_050898_010 0.1154362843 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
10 Hb_000899_060 0.1163183218 - - PREDICTED: uncharacterized protein LOC105793631 [Gossypium raimondii]
11 Hb_004785_170 0.1164965263 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
12 Hb_002592_070 0.1192059143 - - hypothetical protein VITISV_020993 [Vitis vinifera]
13 Hb_015884_010 0.1195857963 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X1 [Jatropha curcas]
14 Hb_002477_080 0.1251101265 - - hypothetical protein RCOM_0653450 [Ricinus communis]
15 Hb_183209_020 0.130240359 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X2 [Jatropha curcas]
16 Hb_000816_050 0.1311246591 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
17 Hb_000497_170 0.1320898154 - - PREDICTED: uncharacterized protein LOC105647275 [Jatropha curcas]
18 Hb_002374_520 0.132629377 - - early nodulin 8 precursor family protein [Populus trichocarpa]
19 Hb_000816_150 0.1386763109 - - oligopeptide transporter, putative [Ricinus communis]
20 Hb_009225_070 0.1409596227 - - tonoplast intrinsic protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000090_020 Hb_000090_020 Hb_103541_010 Hb_103541_010 Hb_000090_020--Hb_103541_010 Hb_012553_030 Hb_012553_030 Hb_000090_020--Hb_012553_030 Hb_002598_020 Hb_002598_020 Hb_000090_020--Hb_002598_020 Hb_000537_090 Hb_000537_090 Hb_000090_020--Hb_000537_090 Hb_000732_100 Hb_000732_100 Hb_000090_020--Hb_000732_100 Hb_001318_230 Hb_001318_230 Hb_000090_020--Hb_001318_230 Hb_103541_010--Hb_012553_030 Hb_050898_010 Hb_050898_010 Hb_103541_010--Hb_050898_010 Hb_183209_020 Hb_183209_020 Hb_103541_010--Hb_183209_020 Hb_103541_010--Hb_000537_090 Hb_103541_010--Hb_002598_020 Hb_000468_050 Hb_000468_050 Hb_012553_030--Hb_000468_050 Hb_002592_070 Hb_002592_070 Hb_012553_030--Hb_002592_070 Hb_015884_010 Hb_015884_010 Hb_012553_030--Hb_015884_010 Hb_009225_070 Hb_009225_070 Hb_012553_030--Hb_009225_070 Hb_002598_020--Hb_000537_090 Hb_026144_040 Hb_026144_040 Hb_002598_020--Hb_026144_040 Hb_000162_070 Hb_000162_070 Hb_002598_020--Hb_000162_070 Hb_008598_010 Hb_008598_010 Hb_002598_020--Hb_008598_010 Hb_002598_020--Hb_001318_230 Hb_001913_030 Hb_001913_030 Hb_000537_090--Hb_001913_030 Hb_000537_090--Hb_000732_100 Hb_001269_530 Hb_001269_530 Hb_000537_090--Hb_001269_530 Hb_000537_090--Hb_001318_230 Hb_001013_080 Hb_001013_080 Hb_000537_090--Hb_001013_080 Hb_000732_100--Hb_001318_230 Hb_114733_010 Hb_114733_010 Hb_000732_100--Hb_114733_010 Hb_000732_100--Hb_001269_530 Hb_173107_020 Hb_173107_020 Hb_000732_100--Hb_173107_020 Hb_001907_050 Hb_001907_050 Hb_001318_230--Hb_001907_050 Hb_004785_170 Hb_004785_170 Hb_001318_230--Hb_004785_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.403176 0.0602632 0.648943 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.145512 0.149087

CAGE analysis