Hb_000091_090

Information

Type -
Description -
Location Contig91: 283752-285806
Sequence    

Annotation

kegg
ID rcu:RCOM_1202340
description hypothetical protein
nr
ID KDP35593.1
description hypothetical protein JCGZ_09031 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KKR3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09031 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62110: 283787-285746 , PASA_asmbl_62111: 284315-284662
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000091_090 0.0 - - hypothetical protein JCGZ_09031 [Jatropha curcas]
2 Hb_021650_030 0.050869995 - - PREDICTED: uncharacterized protein LOC105642056 [Jatropha curcas]
3 Hb_003151_050 0.0587743306 desease resistance Gene Name: MMR_HSR1 PREDICTED: uncharacterized protein LOC105639402 isoform X1 [Jatropha curcas]
4 Hb_000086_570 0.0653705309 - - hypothetical protein JCGZ_24934 [Jatropha curcas]
5 Hb_002411_200 0.065800442 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001881_020 0.0714522937 - - clathrin binding protein, putative [Ricinus communis]
7 Hb_000983_100 0.0722043421 - - PREDICTED: AP-4 complex subunit mu isoform X1 [Vitis vinifera]
8 Hb_000376_050 0.0777264303 - - polyadenylate-binding protein, putative [Ricinus communis]
9 Hb_007672_010 0.0805180904 - - PREDICTED: uncharacterized protein LOC105639669 isoform X1 [Jatropha curcas]
10 Hb_001671_020 0.0839800158 - - PREDICTED: pentatricopeptide repeat-containing protein At5g08510 [Jatropha curcas]
11 Hb_008289_060 0.0852487416 - - PREDICTED: general transcription factor IIE subunit 1-like isoform X1 [Jatropha curcas]
12 Hb_021068_050 0.0876688442 - - PREDICTED: probable rhamnogalacturonate lyase B [Jatropha curcas]
13 Hb_001427_120 0.0877346137 - - PREDICTED: uncharacterized protein LOC105637787 [Jatropha curcas]
14 Hb_000665_040 0.0878377248 - - PREDICTED: stress response protein NST1-like [Jatropha curcas]
15 Hb_002078_450 0.0883874981 - - nuclear transport factor, putative [Ricinus communis]
16 Hb_023386_080 0.0887899322 - - PREDICTED: peroxisome biogenesis protein 19-2-like [Jatropha curcas]
17 Hb_071736_020 0.0893978818 - - hypothetical protein POPTR_0006s10330g [Populus trichocarpa]
18 Hb_002603_100 0.0897028064 - - ATATH9, putative [Ricinus communis]
19 Hb_015001_020 0.089788515 - - PREDICTED: la-related protein 6B [Jatropha curcas]
20 Hb_001243_050 0.0901853127 - - PREDICTED: uncharacterized protein LOC105643776 [Jatropha curcas]

Gene co-expression network

sample Hb_000091_090 Hb_000091_090 Hb_021650_030 Hb_021650_030 Hb_000091_090--Hb_021650_030 Hb_003151_050 Hb_003151_050 Hb_000091_090--Hb_003151_050 Hb_000086_570 Hb_000086_570 Hb_000091_090--Hb_000086_570 Hb_002411_200 Hb_002411_200 Hb_000091_090--Hb_002411_200 Hb_001881_020 Hb_001881_020 Hb_000091_090--Hb_001881_020 Hb_000983_100 Hb_000983_100 Hb_000091_090--Hb_000983_100 Hb_021650_030--Hb_002411_200 Hb_021650_030--Hb_000086_570 Hb_002078_450 Hb_002078_450 Hb_021650_030--Hb_002078_450 Hb_014720_080 Hb_014720_080 Hb_021650_030--Hb_014720_080 Hb_021650_030--Hb_001881_020 Hb_023386_080 Hb_023386_080 Hb_003151_050--Hb_023386_080 Hb_003151_050--Hb_021650_030 Hb_004108_050 Hb_004108_050 Hb_003151_050--Hb_004108_050 Hb_000429_170 Hb_000429_170 Hb_003151_050--Hb_000429_170 Hb_000665_040 Hb_000665_040 Hb_003151_050--Hb_000665_040 Hb_000086_570--Hb_002078_450 Hb_071736_020 Hb_071736_020 Hb_000086_570--Hb_071736_020 Hb_001427_120 Hb_001427_120 Hb_000086_570--Hb_001427_120 Hb_001718_100 Hb_001718_100 Hb_000086_570--Hb_001718_100 Hb_000086_570--Hb_002411_200 Hb_002411_200--Hb_014720_080 Hb_002411_200--Hb_001881_020 Hb_020178_070 Hb_020178_070 Hb_002411_200--Hb_020178_070 Hb_000671_150 Hb_000671_150 Hb_001881_020--Hb_000671_150 Hb_001881_020--Hb_020178_070 Hb_001881_020--Hb_000086_570 Hb_007229_060 Hb_007229_060 Hb_000983_100--Hb_007229_060 Hb_001473_130 Hb_001473_130 Hb_000983_100--Hb_001473_130 Hb_002025_320 Hb_002025_320 Hb_000983_100--Hb_002025_320 Hb_026988_020 Hb_026988_020 Hb_000983_100--Hb_026988_020 Hb_002527_070 Hb_002527_070 Hb_000983_100--Hb_002527_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
156.637 74.4996 27.0496 38.2031 159.925 177.483
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
269.014 231.511 253.768 93.9748 24.6013

CAGE analysis