Hb_000092_130

Information

Type -
Description -
Location Contig92: 126412-137775
Sequence    

Annotation

kegg
ID pop:POPTR_0016s04600g
description POPTRDRAFT_576267; hypothetical protein
nr
ID XP_012087759.1
description PREDICTED: enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic-like [Jatropha curcas]
swissprot
ID Q9SLA8
description Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic OS=Arabidopsis thaliana GN=MOD1 PE=1 SV=1
trembl
ID A0A067JL38
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25533 PE=4 SV=1
Gene Ontology
ID GO:0005835
description enoyl-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62376: 137357-137598
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000092_130 0.0 - - PREDICTED: enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic-like [Jatropha curcas]
2 Hb_000046_490 0.1249749294 - - PREDICTED: uncharacterized protein LOC105646185 [Jatropha curcas]
3 Hb_011316_100 0.1513287231 - - PREDICTED: glycosyltransferase family 64 protein C4-like [Jatropha curcas]
4 Hb_003544_020 0.1540525773 - - PREDICTED: elongin-A [Jatropha curcas]
5 Hb_002301_290 0.1560751256 transcription factor TF Family: SBP Squamosa promoter-binding protein, putative [Ricinus communis]
6 Hb_002183_070 0.1587958873 - - PREDICTED: enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic-like [Jatropha curcas]
7 Hb_002081_070 0.1637660587 - - PREDICTED: pyridoxal kinase [Jatropha curcas]
8 Hb_000326_050 0.1674762445 - - Phenylalanyl-tRNA synthetase alpha chain isoform 2 [Theobroma cacao]
9 Hb_008686_080 0.1692412926 - - PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Jatropha curcas]
10 Hb_001814_070 0.170556598 - - PREDICTED: uncharacterized protein LOC105650638 [Jatropha curcas]
11 Hb_004297_070 0.172641002 - - hypothetical protein POPTR_0009s14820g [Populus trichocarpa]
12 Hb_001221_320 0.1734229381 transcription factor TF Family: NF-YC PREDICTED: nuclear transcription factor Y subunit C-1 isoform X1 [Jatropha curcas]
13 Hb_001019_080 0.1741404333 - - hypothetical protein JCGZ_13280 [Jatropha curcas]
14 Hb_032264_120 0.1747885921 - - hypothetical protein CICLE_v10013128mg [Citrus clementina]
15 Hb_005245_080 0.1748097877 - - PREDICTED: uncharacterized protein LOC105643645 isoform X2 [Jatropha curcas]
16 Hb_003126_090 0.1761464467 - - Rop1 [Hevea brasiliensis]
17 Hb_002045_040 0.1768656777 - - PREDICTED: protein OSB2, chloroplastic-like isoform X1 [Jatropha curcas]
18 Hb_046157_020 0.1777524756 - - PREDICTED: uncharacterized protein LOC105647566 [Jatropha curcas]
19 Hb_000887_020 0.1802723208 - - PREDICTED: uncharacterized protein LOC105633527 [Jatropha curcas]
20 Hb_000684_270 0.1803113683 - - PREDICTED: probable DNA helicase MCM8 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000092_130 Hb_000092_130 Hb_000046_490 Hb_000046_490 Hb_000092_130--Hb_000046_490 Hb_011316_100 Hb_011316_100 Hb_000092_130--Hb_011316_100 Hb_003544_020 Hb_003544_020 Hb_000092_130--Hb_003544_020 Hb_002301_290 Hb_002301_290 Hb_000092_130--Hb_002301_290 Hb_002183_070 Hb_002183_070 Hb_000092_130--Hb_002183_070 Hb_002081_070 Hb_002081_070 Hb_000092_130--Hb_002081_070 Hb_000046_490--Hb_003544_020 Hb_000046_490--Hb_002081_070 Hb_139294_020 Hb_139294_020 Hb_000046_490--Hb_139294_020 Hb_005245_080 Hb_005245_080 Hb_000046_490--Hb_005245_080 Hb_008686_080 Hb_008686_080 Hb_000046_490--Hb_008686_080 Hb_000072_070 Hb_000072_070 Hb_011316_100--Hb_000072_070 Hb_035273_030 Hb_035273_030 Hb_011316_100--Hb_035273_030 Hb_007479_050 Hb_007479_050 Hb_011316_100--Hb_007479_050 Hb_011316_100--Hb_002183_070 Hb_001053_180 Hb_001053_180 Hb_011316_100--Hb_001053_180 Hb_001328_040 Hb_001328_040 Hb_011316_100--Hb_001328_040 Hb_005773_060 Hb_005773_060 Hb_003544_020--Hb_005773_060 Hb_001221_320 Hb_001221_320 Hb_003544_020--Hb_001221_320 Hb_000186_190 Hb_000186_190 Hb_003544_020--Hb_000186_190 Hb_002811_260 Hb_002811_260 Hb_003544_020--Hb_002811_260 Hb_003544_020--Hb_008686_080 Hb_001814_070 Hb_001814_070 Hb_003544_020--Hb_001814_070 Hb_001373_150 Hb_001373_150 Hb_002301_290--Hb_001373_150 Hb_002471_100 Hb_002471_100 Hb_002301_290--Hb_002471_100 Hb_008554_020 Hb_008554_020 Hb_002301_290--Hb_008554_020 Hb_000390_200 Hb_000390_200 Hb_002301_290--Hb_000390_200 Hb_004310_030 Hb_004310_030 Hb_002301_290--Hb_004310_030 Hb_006501_110 Hb_006501_110 Hb_002301_290--Hb_006501_110 Hb_000046_100 Hb_000046_100 Hb_002183_070--Hb_000046_100 Hb_002374_570 Hb_002374_570 Hb_002183_070--Hb_002374_570 Hb_003994_290 Hb_003994_290 Hb_002183_070--Hb_003994_290 Hb_002016_170 Hb_002016_170 Hb_002183_070--Hb_002016_170 Hb_000317_490 Hb_000317_490 Hb_002183_070--Hb_000317_490 Hb_021596_090 Hb_021596_090 Hb_002183_070--Hb_021596_090 Hb_000030_290 Hb_000030_290 Hb_002081_070--Hb_000030_290 Hb_002081_070--Hb_005245_080 Hb_001504_050 Hb_001504_050 Hb_002081_070--Hb_001504_050 Hb_150651_040 Hb_150651_040 Hb_002081_070--Hb_150651_040 Hb_002045_040 Hb_002045_040 Hb_002081_070--Hb_002045_040 Hb_002081_070--Hb_003544_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.04325 0.0480047 0.930357 0.585116 0.34892 0.606619
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.24358 1.1419 0.384834 0.49967 0.213995

CAGE analysis