Hb_000094_040

Information

Type -
Description -
Location Contig94: 24170-26475
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000094_040 0.0 - - -
2 Hb_000078_090 0.1820501977 - - PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase [Jatropha curcas]
3 Hb_113673_010 0.2051048844 - - hypothetical protein POPTR_1763s00200g, partial [Populus trichocarpa]
4 Hb_000618_090 0.2342242307 - - -
5 Hb_063943_010 0.248413714 - - PREDICTED: box C/D snoRNA protein 1 [Jatropha curcas]
6 Hb_010521_030 0.2496437916 - - -
7 Hb_001393_010 0.2573573081 - - hypothetical protein POPTR_0018s06150g [Populus trichocarpa]
8 Hb_000094_080 0.269437216 - - PREDICTED: uncharacterized protein LOC105633792 [Jatropha curcas]
9 Hb_003175_110 0.2701580595 - - -
10 Hb_000964_070 0.278778749 - - PREDICTED: ATP synthase subunit O, mitochondrial [Jatropha curcas]
11 Hb_089206_010 0.2801259091 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
12 Hb_000080_160 0.2832110792 - - Peroxin 13 [Theobroma cacao]
13 Hb_008226_030 0.2839809625 - - RING-H2 finger protein ATL3C, putative [Ricinus communis]
14 Hb_000078_080 0.2910045315 transcription factor TF Family: AUX/IAA hypothetical protein JCGZ_17040 [Jatropha curcas]
15 Hb_003059_010 0.2915260422 - - PREDICTED: uncharacterized protein LOC104236538 [Nicotiana sylvestris]
16 Hb_003327_020 0.2915461829 - - PREDICTED: phytosulfokine receptor 2-like, partial [Jatropha curcas]
17 Hb_000367_120 0.2964120529 transcription factor TF Family: C2H2 hypothetical protein RCOM_1470470 [Ricinus communis]
18 Hb_146339_010 0.2999309898 - - hypothetical protein JCGZ_01613 [Jatropha curcas]
19 Hb_104812_010 0.3023081762 - - PREDICTED: mediator of RNA polymerase II transcription subunit 9 [Populus euphratica]
20 Hb_010366_010 0.3053771332 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]

Gene co-expression network

sample Hb_000094_040 Hb_000094_040 Hb_000078_090 Hb_000078_090 Hb_000094_040--Hb_000078_090 Hb_113673_010 Hb_113673_010 Hb_000094_040--Hb_113673_010 Hb_000618_090 Hb_000618_090 Hb_000094_040--Hb_000618_090 Hb_063943_010 Hb_063943_010 Hb_000094_040--Hb_063943_010 Hb_010521_030 Hb_010521_030 Hb_000094_040--Hb_010521_030 Hb_001393_010 Hb_001393_010 Hb_000094_040--Hb_001393_010 Hb_000078_090--Hb_113673_010 Hb_010366_010 Hb_010366_010 Hb_000078_090--Hb_010366_010 Hb_001565_060 Hb_001565_060 Hb_000078_090--Hb_001565_060 Hb_000078_090--Hb_001393_010 Hb_000094_080 Hb_000094_080 Hb_000078_090--Hb_000094_080 Hb_003175_110 Hb_003175_110 Hb_113673_010--Hb_003175_110 Hb_003327_020 Hb_003327_020 Hb_113673_010--Hb_003327_020 Hb_113673_010--Hb_010521_030 Hb_078106_010 Hb_078106_010 Hb_113673_010--Hb_078106_010 Hb_000816_260 Hb_000816_260 Hb_000618_090--Hb_000816_260 Hb_003994_130 Hb_003994_130 Hb_000618_090--Hb_003994_130 Hb_000618_090--Hb_063943_010 Hb_000964_070 Hb_000964_070 Hb_000618_090--Hb_000964_070 Hb_000080_160 Hb_000080_160 Hb_000618_090--Hb_000080_160 Hb_146339_010 Hb_146339_010 Hb_063943_010--Hb_146339_010 Hb_003059_010 Hb_003059_010 Hb_063943_010--Hb_003059_010 Hb_089206_010 Hb_089206_010 Hb_063943_010--Hb_089206_010 Hb_063943_010--Hb_003175_110 Hb_183443_010 Hb_183443_010 Hb_063943_010--Hb_183443_010 Hb_003124_030 Hb_003124_030 Hb_063943_010--Hb_003124_030 Hb_010521_020 Hb_010521_020 Hb_010521_030--Hb_010521_020 Hb_010521_030--Hb_003175_110 Hb_104812_010 Hb_104812_010 Hb_010521_030--Hb_104812_010 Hb_000883_030 Hb_000883_030 Hb_010521_030--Hb_000883_030 Hb_119622_010 Hb_119622_010 Hb_010521_030--Hb_119622_010 Hb_001178_030 Hb_001178_030 Hb_001393_010--Hb_001178_030 Hb_001279_040 Hb_001279_040 Hb_001393_010--Hb_001279_040 Hb_008226_030 Hb_008226_030 Hb_001393_010--Hb_008226_030 Hb_000806_030 Hb_000806_030 Hb_001393_010--Hb_000806_030 Hb_034585_010 Hb_034585_010 Hb_001393_010--Hb_034585_010 Hb_000367_020 Hb_000367_020 Hb_001393_010--Hb_000367_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0670688 0.0679927 0.0506679 0.0620279 0.0673965 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.108921 0.0247139 0.120766

CAGE analysis