Hb_000094_070

Information

Type -
Description -
Location Contig94: 31700-37806
Sequence    

Annotation

kegg
ID tcc:TCM_034042
description HAD-superfamily hydrolase isoform 1
nr
ID XP_012071852.1
description PREDICTED: 5'-nucleotidase domain-containing protein 4 isoform X2 [Jatropha curcas]
swissprot
ID Q3V1L4
description Cytosolic purine 5'-nucleotidase OS=Mus musculus GN=Nt5c2 PE=1 SV=2
trembl
ID A0A067L1Y8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04430 PE=4 SV=1
Gene Ontology
ID GO:0008253
description 5 -nucleotidase domain-containing protein 4 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63080: 32345-34434 , PASA_asmbl_63081: 34439-35896 , PASA_asmbl_63082: 37257-37516
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000094_070 0.0 - - PREDICTED: 5'-nucleotidase domain-containing protein 4 isoform X2 [Jatropha curcas]
2 Hb_004712_130 0.0713214395 - - PREDICTED: uncharacterized protein LOC105633074 [Jatropha curcas]
3 Hb_003125_170 0.0771125645 - - PREDICTED: uncharacterized protein LOC105648791 [Jatropha curcas]
4 Hb_000181_340 0.0823532819 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 [Jatropha curcas]
5 Hb_001157_240 0.0833323608 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Jatropha curcas]
6 Hb_000039_150 0.0852780301 - - PREDICTED: lysine-specific demethylase JMJ25 isoform X1 [Jatropha curcas]
7 Hb_000366_040 0.0868057612 - - PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Jatropha curcas]
8 Hb_002055_040 0.0870604032 - - PREDICTED: large subunit GTPase 1 homolog [Jatropha curcas]
9 Hb_002769_030 0.0883170562 - - PREDICTED: MATE efflux family protein 4, chloroplastic-like [Jatropha curcas]
10 Hb_008959_010 0.0888087983 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000152_110 0.0892964079 - - PREDICTED: protoheme IX farnesyltransferase, mitochondrial isoform X1 [Jatropha curcas]
12 Hb_027472_070 0.0894102697 - - PREDICTED: uncharacterized protein LOC105646172 [Jatropha curcas]
13 Hb_004787_050 0.0901717884 - - PREDICTED: RINT1-like protein MAG2 [Jatropha curcas]
14 Hb_032202_040 0.0914606937 - - PREDICTED: phospholipase D beta 2 [Jatropha curcas]
15 Hb_000365_240 0.0922969302 - - PREDICTED: mediator of RNA polymerase II transcription subunit 33A-like [Jatropha curcas]
16 Hb_002539_070 0.0936312215 - - PREDICTED: pentatricopeptide repeat-containing protein At1g26460, mitochondrial [Jatropha curcas]
17 Hb_000482_040 0.0936741558 - - Protein YME1, putative [Ricinus communis]
18 Hb_000948_150 0.0948095574 - - PREDICTED: heme-binding-like protein At3g10130, chloroplastic [Jatropha curcas]
19 Hb_003943_110 0.0954813927 transcription factor TF Family: MYB-related Zuotin, putative [Ricinus communis]
20 Hb_012632_010 0.0958904547 - - PREDICTED: uncharacterized protein LOC105640019 [Jatropha curcas]

Gene co-expression network

sample Hb_000094_070 Hb_000094_070 Hb_004712_130 Hb_004712_130 Hb_000094_070--Hb_004712_130 Hb_003125_170 Hb_003125_170 Hb_000094_070--Hb_003125_170 Hb_000181_340 Hb_000181_340 Hb_000094_070--Hb_000181_340 Hb_001157_240 Hb_001157_240 Hb_000094_070--Hb_001157_240 Hb_000039_150 Hb_000039_150 Hb_000094_070--Hb_000039_150 Hb_000366_040 Hb_000366_040 Hb_000094_070--Hb_000366_040 Hb_000497_300 Hb_000497_300 Hb_004712_130--Hb_000497_300 Hb_001999_090 Hb_001999_090 Hb_004712_130--Hb_001999_090 Hb_010344_050 Hb_010344_050 Hb_004712_130--Hb_010344_050 Hb_027472_070 Hb_027472_070 Hb_004712_130--Hb_027472_070 Hb_004712_130--Hb_000366_040 Hb_002235_200 Hb_002235_200 Hb_003125_170--Hb_002235_200 Hb_004374_110 Hb_004374_110 Hb_003125_170--Hb_004374_110 Hb_001635_120 Hb_001635_120 Hb_003125_170--Hb_001635_120 Hb_004787_050 Hb_004787_050 Hb_003125_170--Hb_004787_050 Hb_003125_170--Hb_000181_340 Hb_000193_330 Hb_000193_330 Hb_000181_340--Hb_000193_330 Hb_012632_010 Hb_012632_010 Hb_000181_340--Hb_012632_010 Hb_062226_070 Hb_062226_070 Hb_000181_340--Hb_062226_070 Hb_000181_340--Hb_004374_110 Hb_000103_340 Hb_000103_340 Hb_000181_340--Hb_000103_340 Hb_001999_290 Hb_001999_290 Hb_000181_340--Hb_001999_290 Hb_001157_240--Hb_001999_290 Hb_003943_110 Hb_003943_110 Hb_001157_240--Hb_003943_110 Hb_005736_020 Hb_005736_020 Hb_001157_240--Hb_005736_020 Hb_005582_040 Hb_005582_040 Hb_001157_240--Hb_005582_040 Hb_000640_040 Hb_000640_040 Hb_001157_240--Hb_000640_040 Hb_001008_120 Hb_001008_120 Hb_001157_240--Hb_001008_120 Hb_008959_010 Hb_008959_010 Hb_000039_150--Hb_008959_010 Hb_011228_010 Hb_011228_010 Hb_000039_150--Hb_011228_010 Hb_002769_030 Hb_002769_030 Hb_000039_150--Hb_002769_030 Hb_006501_090 Hb_006501_090 Hb_000039_150--Hb_006501_090 Hb_007426_110 Hb_007426_110 Hb_000039_150--Hb_007426_110 Hb_007765_100 Hb_007765_100 Hb_000039_150--Hb_007765_100 Hb_002063_020 Hb_002063_020 Hb_000366_040--Hb_002063_020 Hb_000352_190 Hb_000352_190 Hb_000366_040--Hb_000352_190 Hb_000388_090 Hb_000388_090 Hb_000366_040--Hb_000388_090 Hb_002099_080 Hb_002099_080 Hb_000366_040--Hb_002099_080 Hb_000366_040--Hb_005736_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.64752 9.88379 9.75956 8.47392 6.32705 7.47385
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.3587 7.25268 17.0918 9.39439 16.4285

CAGE analysis