Hb_000094_120

Information

Type -
Description -
Location Contig94: 89958-94406
Sequence    

Annotation

kegg
ID pop:POPTR_0002s26240g
description POPTRDRAFT_553348; hypothetical protein
nr
ID XP_012071836.1
description PREDICTED: uncharacterized protein At1g01500 [Jatropha curcas]
swissprot
ID Q8GUH2
description Uncharacterized protein At1g01500 OS=Arabidopsis thaliana GN=At1g01500 PE=2 SV=1
trembl
ID A0A067KU32
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04423 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63089: 89900-94360 , PASA_asmbl_63090: 89900-94360 , PASA_asmbl_63091: 92174-92352
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000094_120 0.0 - - PREDICTED: uncharacterized protein At1g01500 [Jatropha curcas]
2 Hb_000094_250 0.1396195428 - - PREDICTED: uncharacterized protein LOC105633774 isoform X3 [Jatropha curcas]
3 Hb_000062_490 0.1445224297 - - PREDICTED: lipoxygenase 6, chloroplastic [Jatropha curcas]
4 Hb_068576_010 0.1533893212 - - hypothetical protein JCGZ_21627 [Jatropha curcas]
5 Hb_002030_180 0.1649476473 - - ring finger protein, putative [Ricinus communis]
6 Hb_006615_160 0.1663941079 - - PREDICTED: UDP-glycosyltransferase 89B1-like [Jatropha curcas]
7 Hb_005539_260 0.1687928762 - - PREDICTED: potassium transporter 6 [Jatropha curcas]
8 Hb_006052_060 0.1688102078 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
9 Hb_000207_290 0.1690633203 - - hypothetical protein JCGZ_03920 [Jatropha curcas]
10 Hb_001226_170 0.1702285867 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
11 Hb_014720_050 0.1711447658 - - PREDICTED: serine/threonine-protein kinase ATM-like [Jatropha curcas]
12 Hb_048476_040 0.1728003751 - - PREDICTED: uncharacterized protein LOC104611656 [Nelumbo nucifera]
13 Hb_050236_010 0.1758968145 - - hypothetical protein EUGRSUZ_E02960, partial [Eucalyptus grandis]
14 Hb_000977_090 0.1759268621 - - hypothetical protein POPTR_0010s18550g [Populus trichocarpa]
15 Hb_003688_230 0.1777029468 - - PREDICTED: ninja-family protein AFP3-like isoform X2 [Jatropha curcas]
16 Hb_000172_050 0.1783284251 - - PREDICTED: uncharacterized protein LOC105650611 [Jatropha curcas]
17 Hb_000567_350 0.1785822314 - - PREDICTED: probable acyl-activating enzyme 6 [Jatropha curcas]
18 Hb_064985_010 0.1802978729 - - Leucine-rich repeat transmembrane protein kinase, putative [Theobroma cacao]
19 Hb_017857_010 0.1805617728 - - -
20 Hb_005649_010 0.1824239513 - - PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]

Gene co-expression network

sample Hb_000094_120 Hb_000094_120 Hb_000094_250 Hb_000094_250 Hb_000094_120--Hb_000094_250 Hb_000062_490 Hb_000062_490 Hb_000094_120--Hb_000062_490 Hb_068576_010 Hb_068576_010 Hb_000094_120--Hb_068576_010 Hb_002030_180 Hb_002030_180 Hb_000094_120--Hb_002030_180 Hb_006615_160 Hb_006615_160 Hb_000094_120--Hb_006615_160 Hb_005539_260 Hb_005539_260 Hb_000094_120--Hb_005539_260 Hb_000009_140 Hb_000009_140 Hb_000094_250--Hb_000009_140 Hb_033234_010 Hb_033234_010 Hb_000094_250--Hb_033234_010 Hb_000094_250--Hb_000062_490 Hb_000120_310 Hb_000120_310 Hb_000094_250--Hb_000120_310 Hb_001123_190 Hb_001123_190 Hb_000094_250--Hb_001123_190 Hb_000692_030 Hb_000692_030 Hb_000062_490--Hb_000692_030 Hb_012727_010 Hb_012727_010 Hb_000062_490--Hb_012727_010 Hb_001178_080 Hb_001178_080 Hb_000062_490--Hb_001178_080 Hb_000062_490--Hb_006615_160 Hb_004656_010 Hb_004656_010 Hb_068576_010--Hb_004656_010 Hb_002597_020 Hb_002597_020 Hb_068576_010--Hb_002597_020 Hb_064985_010 Hb_064985_010 Hb_068576_010--Hb_064985_010 Hb_168068_010 Hb_168068_010 Hb_068576_010--Hb_168068_010 Hb_000847_020 Hb_000847_020 Hb_068576_010--Hb_000847_020 Hb_043987_010 Hb_043987_010 Hb_002030_180--Hb_043987_010 Hb_005814_010 Hb_005814_010 Hb_002030_180--Hb_005814_010 Hb_000495_050 Hb_000495_050 Hb_002030_180--Hb_000495_050 Hb_000031_160 Hb_000031_160 Hb_002030_180--Hb_000031_160 Hb_002477_100 Hb_002477_100 Hb_002030_180--Hb_002477_100 Hb_000009_150 Hb_000009_150 Hb_002030_180--Hb_000009_150 Hb_017857_010 Hb_017857_010 Hb_006615_160--Hb_017857_010 Hb_001329_080 Hb_001329_080 Hb_006615_160--Hb_001329_080 Hb_000853_100 Hb_000853_100 Hb_006615_160--Hb_000853_100 Hb_000009_300 Hb_000009_300 Hb_006615_160--Hb_000009_300 Hb_006615_160--Hb_002030_180 Hb_000172_050 Hb_000172_050 Hb_006615_160--Hb_000172_050 Hb_001486_200 Hb_001486_200 Hb_005539_260--Hb_001486_200 Hb_023344_060 Hb_023344_060 Hb_005539_260--Hb_023344_060 Hb_002027_030 Hb_002027_030 Hb_005539_260--Hb_002027_030 Hb_000554_030 Hb_000554_030 Hb_005539_260--Hb_000554_030 Hb_000913_080 Hb_000913_080 Hb_005539_260--Hb_000913_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.30086 72.2095 39.1156 44.5491 0.396619 1.9176
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.11228 2.49786 17.8981 37.9457 13.5152

CAGE analysis