Hb_000094_320

Information

Type -
Description -
Location Contig94: 240939-254731
Sequence    

Annotation

kegg
ID rcu:RCOM_1593890
description kinase, putative (EC:2.7.11.13)
nr
ID KDP38482.1
description hypothetical protein JCGZ_04407 [Jatropha curcas]
swissprot
ID F4HPN2
description Probable serine/threonine protein kinase IRE4 OS=Arabidopsis thaliana GN=IRE4 PE=2 SV=1
trembl
ID A0A067KQR7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04407 PE=4 SV=1
Gene Ontology
ID GO:0004697
description kinase superfamily protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63116: 245463-246359 , PASA_asmbl_63117: 248370-249555 , PASA_asmbl_63118: 248354-249357 , PASA_asmbl_63120: 251399-254579
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000094_320 0.0 - - hypothetical protein JCGZ_04407 [Jatropha curcas]
2 Hb_000347_120 0.0780734968 - - PREDICTED: uncharacterized protein LOC105631363 [Jatropha curcas]
3 Hb_004371_010 0.0799147197 transcription factor TF Family: bZIP PREDICTED: transcription factor HBP-1b(c38)-like isoform X3 [Jatropha curcas]
4 Hb_007193_110 0.0809097447 - - PREDICTED: E3 ubiquitin-protein ligase RNF14 [Jatropha curcas]
5 Hb_012114_050 0.0838370588 - - PREDICTED: uncharacterized protein LOC105645815 isoform X1 [Jatropha curcas]
6 Hb_000526_060 0.0865585319 - - PREDICTED: clustered mitochondria protein [Jatropha curcas]
7 Hb_004410_070 0.0879830932 - - PREDICTED: protein LTV1 homolog [Jatropha curcas]
8 Hb_004032_040 0.0893554724 - - unknown [Medicago truncatula]
9 Hb_007426_060 0.0905546559 desease resistance Gene Name: NB-ARC unnamed protein product [Coffea canephora]
10 Hb_052764_060 0.0907845479 - - XPA-binding protein, putative [Ricinus communis]
11 Hb_000556_170 0.0916225168 - - PREDICTED: uncharacterized protein LOC105643102 isoform X2 [Jatropha curcas]
12 Hb_000896_060 0.0918058254 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
13 Hb_000544_060 0.0963112172 - - PREDICTED: serine/threonine-protein kinase EDR1 [Jatropha curcas]
14 Hb_007818_030 0.0980922034 - - PREDICTED: transcriptional corepressor SEUSS-like [Jatropha curcas]
15 Hb_000735_160 0.098960718 - - PREDICTED: uncharacterized protein LOC105644513 [Jatropha curcas]
16 Hb_000661_200 0.0996439575 - - PREDICTED: uncharacterized protein LOC105648311 isoform X1 [Jatropha curcas]
17 Hb_000373_100 0.1000126984 transcription factor TF Family: bZIP PREDICTED: transcription factor VIP1 [Jatropha curcas]
18 Hb_000768_180 0.1026401059 - - PREDICTED: uncharacterized protein LOC105632528 [Jatropha curcas]
19 Hb_007054_040 0.1037510079 - - PREDICTED: protein RST1 [Jatropha curcas]
20 Hb_029223_050 0.1046768509 - - PREDICTED: uncharacterized protein LOC105642267 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000094_320 Hb_000094_320 Hb_000347_120 Hb_000347_120 Hb_000094_320--Hb_000347_120 Hb_004371_010 Hb_004371_010 Hb_000094_320--Hb_004371_010 Hb_007193_110 Hb_007193_110 Hb_000094_320--Hb_007193_110 Hb_012114_050 Hb_012114_050 Hb_000094_320--Hb_012114_050 Hb_000526_060 Hb_000526_060 Hb_000094_320--Hb_000526_060 Hb_004410_070 Hb_004410_070 Hb_000094_320--Hb_004410_070 Hb_000373_100 Hb_000373_100 Hb_000347_120--Hb_000373_100 Hb_005389_160 Hb_005389_160 Hb_000347_120--Hb_005389_160 Hb_010417_070 Hb_010417_070 Hb_000347_120--Hb_010417_070 Hb_004440_040 Hb_004440_040 Hb_000347_120--Hb_004440_040 Hb_000347_120--Hb_004410_070 Hb_000061_490 Hb_000061_490 Hb_004371_010--Hb_000061_490 Hb_000768_180 Hb_000768_180 Hb_004371_010--Hb_000768_180 Hb_144744_010 Hb_144744_010 Hb_004371_010--Hb_144744_010 Hb_004371_010--Hb_000347_120 Hb_000735_160 Hb_000735_160 Hb_004371_010--Hb_000735_160 Hb_007193_110--Hb_012114_050 Hb_007193_110--Hb_004410_070 Hb_007576_220 Hb_007576_220 Hb_007193_110--Hb_007576_220 Hb_000556_170 Hb_000556_170 Hb_007193_110--Hb_000556_170 Hb_001021_200 Hb_001021_200 Hb_007193_110--Hb_001021_200 Hb_012114_050--Hb_004410_070 Hb_012114_050--Hb_000556_170 Hb_000625_120 Hb_000625_120 Hb_012114_050--Hb_000625_120 Hb_012114_050--Hb_007576_220 Hb_000896_060 Hb_000896_060 Hb_000526_060--Hb_000896_060 Hb_000117_070 Hb_000117_070 Hb_000526_060--Hb_000117_070 Hb_007818_030 Hb_007818_030 Hb_000526_060--Hb_007818_030 Hb_120470_010 Hb_120470_010 Hb_000526_060--Hb_120470_010 Hb_155159_010 Hb_155159_010 Hb_000526_060--Hb_155159_010 Hb_000703_130 Hb_000703_130 Hb_000526_060--Hb_000703_130 Hb_007017_070 Hb_007017_070 Hb_004410_070--Hb_007017_070 Hb_000723_110 Hb_000723_110 Hb_004410_070--Hb_000723_110 Hb_002542_130 Hb_002542_130 Hb_004410_070--Hb_002542_130 Hb_000700_060 Hb_000700_060 Hb_004410_070--Hb_000700_060 Hb_004410_070--Hb_010417_070 Hb_000069_130 Hb_000069_130 Hb_004410_070--Hb_000069_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.59577 8.19865 2.75065 1.42101 3.87205 2.75641
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.25486 2.00247 1.96518 3.23504 2.25126

CAGE analysis